Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00019 ATGGAAGCACAAAGCTCTCAGCAAACACAAGTTATTGAGATCAGTGGAGATTTTCCTGATGGTGGAAGAAAGATTTGTGGGGAAGCACCATGTGGGTTTGCAGATGCCGAATCCATCTCCAAGGATTCTGAAGAAAGATCAACTTCTATGCGAAAGCTCCTTATGGCAGTGATCCTTTGTGTTATTTTTATGACTGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATACTGACTGATGCAGCACATTTGCTTTCTGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTGTGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAAATTCTTGGTGCCTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGTATTCTGGTATATGAAGCCATTGATAGAATCATTGCTGGTCCTAAAAGCGTGGATGGTTTCTTAATGTTTTTAGTTTCCGCATTTGGTCTCGTGGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCATGGACATGGTGGTCATGGTCATGGACACGGACATGATCATGATGGTCACAGACATGGACATGCCCACAGTCATGGATTTACAGTTTCTACCCATCATGATGCAAAACATGCAAAAGATGAGCACCATCACACACATGATCACTCAGACCATCACGATGATCATCATTCAAAAGATGAGCACCATCATGATCACCAAGAGCTTACTCAATCTCTTCTTGATGAATCAAAAGCTAAGAAGAAGAAGCAATGGAACATAAATGTACAGGGGGCTTATCTCCATGTCCTTGGAGACTCTATCCAAAGTATTGGAGTAATGATTGGAGGAGCCGTAATATGGTATAAACCTGAGTGGCAAATAGTTGATTTAATTTGCACTTTAATATTTTCAGTAATAGTTTTGGTGACAACCATCAATATGCTGCGAAATATTTTGGAAGTCCTGATGGAGAGCACGCCTCGTGAGATAGATGCTACTAAGTTAGAAAGGGGGCTGTTGGATATGGAAGACGTGGTGGCTGTTCATGAACTGCACATATGGGCCATCACAGTCGGAAAGGTTTTACTAGCTTGTCATGTTAAAATTAGACGGGAAGCAGATGCAGATGTGGTGCTGGACAAGGTTATAGATTATATCAAACGGGTGTATAACATCAGTCATGTAACCATACAGATAGAACGCTAG 1224 0.4167 MEAQSSQQTQVIEISGDFPDGGRKICGEAPCGFADAESISKDSEERSTSMRKLLMAVILCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHGGHGHGHGHDHDGHRHGHAHSHGFTVSTHHDAKHAKDEHHHTHDHSDHHDDHHSKDEHHHDHQELTQSLLDESKAKKKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLVTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADVVLDKVIDYIKRVYNISHVTIQIER 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00019 407 MobiDBLite consensus disorder prediction 182 250 - -
Vimu9g00019 407 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 335 406 IPR036837 -
Vimu9g00019 407 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 330 IPR027469 -
Vimu9g00019 407 MobiDBLite consensus disorder prediction 207 250 - -
Vimu9g00019 407 Gene3D Cation efflux protein transmembrane domain 49 328 IPR027469 -
Vimu9g00019 407 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 22 407 - -
Vimu9g00019 407 MobiDBLite consensus disorder prediction 183 206 - -
Vimu9g00019 407 Pfam Cation efflux family 53 329 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vimu9g00019 407 NCBIfam cation diffusion facilitator family transporter 50 407 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00019 Vimu-Chr9 190520 191743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00019 11 407 Inorganic Solute Cotransporters AT3G58810 64.516 1.22e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00019 K14689 - gmx:100790458 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00019 9 190520 191743 Vimu9g00019 9 190520 191743 ECH