Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02696 ATGGCATGTTCTGATTTCAGGAAAATCTGTATCAGTGGATTTGGAGACAACAAGAAGGAGAATCAAGGGTTGCAACAGTTGATGTGCTCAACTACATTCAGGAACCAGCATCGGAGCTCTGAAGGAAGTCGTGATTCCCCGGAAAACTCGGAGGAGAAATCGGAAGAAGACATAGGAGAAGTTCGACGCAATTGGAGGAAGCGGGTTGGACTACCTACATTTGACGGTGTGGATCCTATGGGCTGGATCGCACAGGTAGAGAAATTCTTTGACCAACAGAGCGTGACGGAGAAGGAGAAGATGAAGCTCGTTTATATATGCATGGAGGGAGGTGTAGCGAGCTTTTGGTTCCGGTTCTGGCGGAAGAAAACCACACATCCGACTTGGAAGATGTTTACCGATGCTCTGACGCGGAGGTTTGGCGGACTAAATCGGGGCACTGTTTGTGAGGAGCTGGTAGCGGAGCAACAGGAGGGGAGTGTCAATGAGGACATTCAGGAGTTAGAAATTCTGGTGCCGCAAGCATTGGGAAAACTAGATCACTCTTCATTTTCTATCCCTGTAGATCTTGGAACCAGCATTATGACGGGTGTTGAGGCTGATGTGGCCACTGAGCGAAGACCAGATCCGTCCTCGTTAATTTGTGCTCAGTTGGGCCTTGAGTTGACAGCGGTGAACAGTGATTGCCGTTTTTATGACATAGTCACAGAACAAAAAGTTTTTGCAAATATGGATGAAGCACTTGAAGCTGATTATAATACCACTATGGATGACATGGTATTAGGTGTTGTTCAGAAAGGTGAACAAGCAATGAAAATGTCTCTTGAAGACAGTTTAGAATATGGCCTCAAGATTCGGCGTACTGCACACATCGAAAGCAGTGAAGAAATGGAACAAAACAGAGAGGAACTTGTTCTCTGGTGGATACAAAATGTGGTGGGGTCACAGAGAGTTTTATGGAGGATCTTGTCATTGATAGAGCAGAAAGAGGAGTCAAGAGGGAATGAGTTGAATGTTAAGCCTATAAGGGATTATCGGCACAAGGTTGAGTTGGAGTTGTGTAACACTTGCAGTGATATTATGATAATTTTAAATGAGCATCTTATCCCATCCACTAATATTGCGGAGTCCACAATGTTTTATTATAAGATGAAAGAAGACTATTATCGGTATTAG 1176 0.443 MACSDFRKICISGFGDNKKENQGLQQLMCSTTFRNQHRSSEGSRDSPENSEEKSEEDIGEVRRNWRKRVGLPTFDGVDPMGWIAQVEKFFDQQSVTEKEKMKLVYICMEGGVASFWFRFWRKKTTHPTWKMFTDALTRRFGGLNRGTVCEELVAEQQEGSVNEDIQELEILVPQALGKLDHSSFSIPVDLGTSIMTGVEADVATERRPDPSSLICAQLGLELTAVNSDCRFYDIVTEQKVFANMDEALEADYNTTMDDMVLGVVQKGEQAMKMSLEDSLEYGLKIRRTAHIESSEEMEQNREELVLWWIQNVVGSQRVLWRILSLIEQKEESRGNELNVKPIRDYRHKVELELCNTCSDIMIILNEHLIPSTNIAESTMFYYKMKEDYYRY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02696 391 MobiDBLite consensus disorder prediction 33 59 - -
Vimu8g02696 391 PANTHER 14-3-3 PROTEIN 291 391 IPR000308 -
Vimu8g02696 391 Gene3D - 268 391 IPR036815 -
Vimu8g02696 391 SMART 1433_4 256 391 IPR023410 -
Vimu8g02696 391 SUPERFAMILY 14-3-3 protein 291 391 IPR036815 -
Vimu8g02696 391 PRINTS 14-3-3 protein zeta signature 345 369 IPR000308 -
Vimu8g02696 391 PRINTS 14-3-3 protein zeta signature 376 391 IPR000308 -
Vimu8g02696 391 PRINTS 14-3-3 protein zeta signature 296 325 IPR000308 -
Vimu8g02696 391 MobiDBLite consensus disorder prediction 38 59 - -
Vimu8g02696 391 Pfam 14-3-3 protein 291 391 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02696 Vimu-Chr8 37720310 37721803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02696 310 391 14-3-3 family AT1G26480 62.195 9.45e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02696 - - var:108330141 210.69