Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02686 ATGGCTAGGTCTTGTGCTTATCCTCTGCACTGTTTGTTCTTGATTTCTTCCATTTTGTTCAGTGCACAGATAGATGCCTCCCAAACAGAAGGCAAAGCACCAGTAGTAAAGGGACTCTCATATTCTTTCTATTCCAAAACCTGTCCCAAACTTGAAACCATTGTCAGAAACCATCTCAAGAAGGTCTTCAAGAACGACAATGGCCAAGCTCCTGCCTTACTCCGCATTTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGGGTCGGTGCTGCTAGATGGGAGTCCAGGTGAAAGAGACCAACCAGCAAACGGAGGAATAAGAAGTGAGGCTTTGGAAACCATTGATGATCTCAGAGCTCTTGTTCATAAGGAGTGTGGAAGAATCGTTTCTTGCGCAGATATCACTGTCTTGGCAGCACGTGATGCTGTTTCTCTTACAGGAGGCCCTGATTATGCAGTGCCACTGGGAAGACGAGACGGTGTAAGCTTCAGCACATCAGGAACACGTGACCTTCCCAAACCCTTCAACACCACCGGCGCCACCCTCGACGCTTTCGCCGCCAAAAGCTTCGATGCCACAGACGTCGTGGCCTTATCAGGCGCACACACCTATGGCCGTGCACACTGCAGCACCTTCTTCAACAGGCTTTCCCCTCTGGACCCCAACATGGACAAAACCCTAGCCAAGCAACTCCAATCCACGTGCCCAAATGCAGACTCCGGCAACACAGCCAACTTGGACATCAGAACGCCCACGGTGTTTGATAACAAATACTACCTTGATTTGATGAACCGTCAGGGAGTGTTCACCTCTGACCAGGACCTGTTCAGTGATAAGAGGACAAAAGGGTTGGTGAATGCTTTCGCTCTTAACCAAACCCTGTTCTTTGAGAAGTTTGTGGATGCTGTTGTGAGGCTGAGTCAGTTGGATGTGTTGACCGGAAACCAGGGTGAGATTCGTGCCAAATGCAATGTGGTGAATAGCAAGAAATCTGTGTTGGAAGAGGTGGTGCAATTTGTTTATCAGTTTTGA 1035 0.485 MARSCAYPLHCLFLISSILFSAQIDASQTEGKAPVVKGLSYSFYSKTCPKLETIVRNHLKKVFKNDNGQAPALLRIFFHDCFVQGCDGSVLLDGSPGERDQPANGGIRSEALETIDDLRALVHKECGRIVSCADITVLAARDAVSLTGGPDYAVPLGRRDGVSFSTSGTRDLPKPFNTTGATLDAFAAKSFDATDVVALSGAHTYGRAHCSTFFNRLSPLDPNMDKTLAKQLQSTCPNADSGNTANLDIRTPTVFDNKYYLDLMNRQGVFTSDQDLFSDKRTKGLVNAFALNQTLFFEKFVDAVVRLSQLDVLTGNQGEIRAKCNVVNSKKSVLEEVVQFVYQF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02686 344 ProSiteProfiles Plant heme peroxidase family profile. 38 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 FunFam Peroxidase 42 184 - -
Vimu8g02686 344 Gene3D Peroxidase, domain 2 173 307 - -
Vimu8g02686 344 PANTHER - 22 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 CDD secretory_peroxidase 38 327 IPR033905 GO:0004601|GO:0042744
Vimu8g02686 344 SUPERFAMILY Heme-dependent peroxidases 38 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Vimu8g02686 344 Pfam Peroxidase 55 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Vimu8g02686 344 Gene3D - 42 328 - -
Vimu8g02686 344 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02686 344 FunFam Peroxidase 173 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02686 Vimu-Chr8 37526862 37539598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02686 24 339 Peroxidase AT1G71695 55.247 8.78e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02686 K00430 - gmx:547550 603.208