Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02685 ATGGCAAAGTCTTGCAGTTCTTTAAATTCTTTGTTCTTGATTTGTTCTATTCTATTTAGTTCCTACTTGATTTGCTGTGAGGCAGAAGGCAATCCCGCAGTGGTGAATGGATTATCTTATTCCTTCTATTCCGAAAGCTGTCCCAACCTTGAAACCATTGTCACAAACCATCTCAGAAAGGTGTTCAACCAAACTCATTGGCAAGCTCCAGCCTTGCTCGCCATTTTCTTCCATGATTGTTTTGTTCAGGGATGTGATGGATCTTTGCTACTGGATGGTAATCCAGGTGAAAGGGATCATCCACTGAATAGAGGCATAAGCTCTAAGGCTCTGCATACCATTGATGAACTAAGAGAAGTTGTTCACAACCACTGTGGAAGGATAGTTTCATGTGCAGATATCACTGTCTTGGCAGCTCGTGATTCTATTTTTCTTTCTGGAGGTCCCTATTTCAATGTGCCATTTGGAAGACGAGACAGTCTAAACTTTAACATTGAAGAAACAAACAATCTTCCATTACCCTACAACATTACTGATGTCACACTCAAAACATTTGAATCCAAAAACTTGGATGTTACAGATGTGGTTGCCTTATCAGGTGCACACACCATTGGTCGTGCCCACTGTCATACATTCTACAACAGGCTTTCTCCTCAAGATCCCACCATGGACAAAACCTTAGCTAAACTCCTTAATTCTACTTGCCCTACCACATACTCACGTAACACTTTTCCTTTGGACTTCAGAACCCCCAAAATCTTCGATAACAAATACTACATTAACTTGATGAATCACCAAGGTTTGTTCACTTCCGACCAAGACTTGTTCAAAGACAAGAGGACAAAAGGGTTGGTAGAGGCCTTTGCACTTAATCAAACCTTCTTCTTCCACAAATTCATTCATGCTTTTATAAAGATGAGCCAATTGGATGTGTTGACTCGAAATCAAGGTGAAATTCGTGCCAAATGTAATCTGATAAATGATGAGAGTTCTACAGTGAAGTCTATTGTGGATGATGAGATTGTACAATTACCCAATTGA 1041 0.4006 MAKSCSSLNSLFLICSILFSSYLICCEAEGNPAVVNGLSYSFYSESCPNLETIVTNHLRKVFNQTHWQAPALLAIFFHDCFVQGCDGSLLLDGNPGERDHPLNRGISSKALHTIDELREVVHNHCGRIVSCADITVLAARDSIFLSGGPYFNVPFGRRDSLNFNIEETNNLPLPYNITDVTLKTFESKNLDVTDVVALSGAHTIGRAHCHTFYNRLSPQDPTMDKTLAKLLNSTCPTTYSRNTFPLDFRTPKIFDNKYYINLMNHQGLFTSDQDLFKDKRTKGLVEAFALNQTFFFHKFIHAFIKMSQLDVLTRNQGEIRAKCNLINDESSTVKSIVDDEIVQLPN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02685 346 FunFam Peroxidase 172 306 - -
Vimu8g02685 346 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 FunFam Peroxidase 41 183 - -
Vimu8g02685 346 SUPERFAMILY Heme-dependent peroxidases 37 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 CDD secretory_peroxidase 37 326 IPR033905 GO:0004601|GO:0042744
Vimu8g02685 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Vimu8g02685 346 Gene3D - 42 324 - -
Vimu8g02685 346 PANTHER - 29 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 ProSiteProfiles Plant heme peroxidase family profile. 37 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 Pfam Peroxidase 55 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g02685 346 Gene3D Peroxidase, domain 2 173 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02685 Vimu-Chr8 37521070 37523373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02685 34 330 Peroxidase AT1G71695 53.135 5.07e-111 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02685 K00430 - gmx:100816373 523.857