Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02684 ATGTTACAGACTGAGTGGACTAGGGAAGAGGATGAGAAGTTACTTCATCTTGCTAAGCTCATGCCCACTCAGTGGAGAACAATTGCTCCAATTGTAGGTCGTACACCTTCTCAGTGTCTTGAGCGGTATGAGAAGCTCCTTGATGCAGCCTGTGTAAAAGATGAGAATTATGAGCCTGGTGATGATCCTCGAAAATTGCGTCCTGGGGAGATTGATCCAAACCCCGAGTCAAAACCTGCACGGCCTGATCCTGTTGATATGGATGAGGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGATTAGCCAACACAAAGGGAAAGAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCGAGGAGGCTTGCTTCCCTACAAAAGAAGAGGGAATTGAAGGCGGCTGGAATTGATATCAGGCAACGGAAGAGGAAAAGGAAAGGAATAGACTACAATGCAGAAATTCCATTTGAGAAAAGGCCTCCTCCAGGGTTTTTCGATGTTGCAGATGAAGATAGACCAGTGGAACAGCCCAAGTTCCCTACTACAATTGAAGAACTTGAGGGGAAAAGGAGGGTTGATATTGAGGCACAATTAAGAAAGCAGGACATTGCAAAAAATAAAATTGCACAAAGGCAAGATGCCCCATCTGCCATATTACATGCCAACAAATTGAATGATCCAGAAACAGTAAGAAAGAGGTCAAAATTGATGCTTCCACCACCCCAGATATCTGATCAAGAATTGGATGAAATTGCTAAGTTGGGTTATGCTAGTGACCTTGCAGGGAGTCAAGAACTTACTGAAGGTAGTGGTGCTACACGTGCTCTTCTGGCTAATTATGCACAGACACCCGGTCAAGGAGTGACTCCTTTGCGAACCCCTCAGAGAACACCATCTGGTAAAGGAGATGCTATTATGATGGAAGCTGAAAATCTTGCCAGGTTGAGGGAGTCTCAAACACCATTGTTGGGAGGAGAGAATCCGGAGTTGCATCCTTCAGATTTTTCTGGTGTCACTCCTAAGAAAAAAGACATTCAGACTCCAAATCCAATGCTGACCCCATCTGCTACTCCTGGAGGTGCAGGCCTCACTCCAAGAGTTGGTATGACACCAACAAGAGATGGTTTTTCTTTTAGCATGACACCAAAGGGGACTCCTTTGAGGGATGAACTACGTATTAATGAGGACATGAATATGCATGACAGCACTAAACGTGAGCTGCAGAGACAGGCTGATATGAGAAGAAGTCTGCGTTCTGGTTTAGGAAGCCTTCCTCAGCCCAAGAATGAGTACCAAATAGTGATGGAACCAGTCACAGAAGATGCCGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGACAGGATAGCTAGAGAAAAAGCAGAAGAAGAGGCAAGACAGCAGGCATTACTTAGAAAACGATCAAAGGTCCTTCAACGAGAACTTCCTAGGCCCCCTGCTACTTCATTGGAGCTTATAAGAAATTCCTTAATTAGATCTGATGGGGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAGGCTGATGAAATGATTAGAAAGGAGCTTCTAACTTTATTGGAGCATGACAATGCCAAGTATCCGCTTGATGATAAAGTGAATAAGGAGAAAAAGAAAGGAGTCAAGCGATCTACAGATTTGTCTGCTGTCCCTGTGATAGAAGATTTTGAGGAAGATGAAATGAAAGATGTATGTCCTGACTTGTTTCTTTTTCCTTTCCGTTTTTGA 1764 0.4416 MLQTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRKRKRKGIDYNAEIPFEKRPPPGFFDVADEDRPVEQPKFPTTIEELEGKRRVDIEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLAGSQELTEGSGATRALLANYAQTPGQGVTPLRTPQRTPSGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKDIQTPNPMLTPSATPGGAGLTPRVGMTPTRDGFSFSMTPKGTPLRDELRINEDMNMHDSTKRELQRQADMRRSLRSGLGSLPQPKNEYQIVMEPVTEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPATSLELIRNSLIRSDGDKSSFVPPTSIEQADEMIRKELLTLLEHDNAKYPLDDKVNKEKKKGVKRSTDLSAVPVIEDFEEDEMKDVCPDLFLFPFRF 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02684 587 MobiDBLite consensus disorder prediction 155 182 - -
Vimu8g02684 587 MobiDBLite consensus disorder prediction 343 357 - -
Vimu8g02684 587 Pfam Myb-like DNA-binding domain 6 56 - -
Vimu8g02684 587 MobiDBLite consensus disorder prediction 166 182 - -
Vimu8g02684 587 MobiDBLite consensus disorder prediction 286 305 - -
Vimu8g02684 587 SUPERFAMILY Homeodomain-like 4 53 IPR009057 -
Vimu8g02684 587 FunFam CDC5 cell division cycle 5-like 3 64 - -
Vimu8g02684 587 MobiDBLite consensus disorder prediction 209 230 - -
Vimu8g02684 587 CDD SANT_CDC5_II 4 50 IPR047240 -
Vimu8g02684 587 Coils Coil 111 131 - -
Vimu8g02684 587 MobiDBLite consensus disorder prediction 54 94 - -
Vimu8g02684 587 ProSiteProfiles Myb-like domain profile. 1 47 IPR001005 -
Vimu8g02684 587 SMART sant 2 49 IPR001005 -
Vimu8g02684 587 MobiDBLite consensus disorder prediction 391 416 - -
Vimu8g02684 587 MobiDBLite consensus disorder prediction 317 434 - -
Vimu8g02684 587 Pfam pre-mRNA splicing factor component 350 574 IPR021786 -
Vimu8g02684 587 Gene3D - 3 58 - -
Vimu8g02684 587 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 51 IPR017930 -
Vimu8g02684 587 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 3 575 IPR047242 GO:0000398|GO:0000974
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02684 3 576 MYB-Related Transcription Factor Family AT1G09770 82.496 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vimu8g02684 Myb_Cef 6.3e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02684 K12860 - gmx:100801352 1022.31