Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu8g02683 | ATGATTGCAGAAAAATTCTATCTTTTTGAATTAGGAGGAGTAGATTTAATTCTGGGAGTTTCGTGGTTGGCTACTTTAGGAGAAGTTAAGACTAATTGGAAGACTTTAACTATGAGATTTAATCAAGATGCAAGGGAAGTGAGAATTCAAGGACATCCAACTCTGACAAAAAGAGTTATTACACCAGAGGCATTATTGAAAGAAACTGAGATTGAAGTGGTTTCTGTGGTATGGAATATGGGTTATACAAAGTTAGAGGAGAGGGTGGATGATGGTGAAAAATTGCAGCCAGAACAGCAAGCAGAGTTAGAGGAAATTTTGGAAGATTTTGAGGATATTTTCCAAGAACCAAAAGGATTACCTCCTAACAGGTTAATGAACCATCGAATTCCTATCAAAGTAGGAGTGGATCCTGTGAATGAGTTACTAGATGAATTAAATGGGGCTACTTATTTTTCTAAAGTTGATTTGAAGGCTGGATACCACCAAATCCGGATGGAGGAGAAAGATATTTCAAAGACTACTTTTTGTACTCATCAAGGGCATTATGAATTTTTGGTGATGTCATTTGGATTATCTAACGCTCCTGCCACTTTTCAATGTTTAATGAACACGGTATTGAGGCAGTTTTTGAGGAGATGTGTACTAGTTTTCTTTGATGATATTTTAATTTACAGCAATTCATGGGAGGAACATAGGGACCATCTAAAGCAAGTTCTTCAAACATTGAGACAACAACAACTGTATGCCAATAAGAAGAAATGTGACTTTGGCAGGTTACAAATCAAATATTTGGGACATTGTATTTCCAGAAAAGGAGTGATGATGGATCCAGAGAAGATTAAAGCTGTGAAGGAATGGCCTGAACCACATAACATCAAAGATTTAAGGGGATTCCTAGGGCTATCGGGATATTATCGGCGCTTTATTAAGGATTATGGGAAGATTGCTAAGCCATTGACAGATCTCTTACGAAAGGGCCAGTTTAAATGGACTTCCAAAGGTAAAGCAGCCATGCAAACCCTTAAAATTGCTCTCACCTCAGCACCATTGTTAGCACTACCTGATTTTTCACAGATTTTCCATGTGGAGTGTGATGCATCTGGAAAAGAAGGAACTGAGGCTTTGGTTCTTTCTATTCAACATTGGGGACCATATTTGTTGGGGAAAAAATTTGTGGTGCATACAGATCAAAGAAGTTTGAGGTATTTATTGGAACAACGTATTACCACTCAAAATCAAAAAAATTGGTTGGCCAAGCTTTTGGGTTATGAGTTTGAGATTGCATACAGATCTGGTGCTACTAACAAGGTGGTTGATGCCTTGTCACGCCAATTGGAGGAGCCAGAAACTGCAGAGTTAGAATTGAAGGGCATTTCTAGACCTTTTTGGCAGGATTTTCAGGAAATAATGGGGGAAGTACAACAGGATATTGTACTCCAAAAGATCATTACTGATTTGGACAACAACCCTGATTCACATCCTAATTTCACAATGGAGCATGACCGACTGCACTATAAAGGAACGATGGTTCTTTCGGCCAAATCAGTTTGGGTTCAAAAGTTAATTGCAGAATTTCATGTTACACAAACTGGGGGACATTTTGGAGTCTTCAGAACGTATAGGAAGTTGGCTCAAACTCTTTATTGGATAGGCACGAAGAAGGATGTCACGGAATTTGTTGCTTCTTGTTTGAAATATTGTGACCAAAATGGAGTCACTCCAAAGTGCTCTTTCTCCTCTCACAGTTGCACTTCTGGTTCTAATCCCGCCATTCCTCTACCTCTTCCTTGTGCTCCACCGCACCAGAATCAAAGAACCACCCACAATCCCCGGCACATGGCCGATTATCGGCCACCTCCCCCTGCTAGCGCGGTCCCCCGCCACCCACTACCTCTTGGGCACGTTGGCGGACCGTCATGGCCTCATCTTCAACATCAATATAGGCACAGTGAAAACCGTAGTCATCAACAACTGGGAAATGGCGAAAGAGTGCTTCAACACAAACGTAACCTGCCAAAACATGACCTACAACCTCGCCATGCTCGGATTCGCACCCTACGGAACGTTGCGTTTGTGTTCGTCGCAGACCACCGCATCGACACGCTCTCACACGTGCGCATCTCCGAGGTGAGAACCTTAGCGAAAGAGCTTTACTACAAGTGGAAACGTGGAAAAACAGAGAAGGACTTTTTTATGGTGGACATGACGCAGTGGCTGAAGGAAGTTGCGTTCAACGTGCTGCTGAGGATGGTTGCCGGGAAGAGGTACTTCGGAGAAAAAGCGGTGGTTGACGAGGAAGAAGCGCGAATATGTTTGGGGATGTTCAAAGAATACATGCGGCTATTTGGTGTTTTCATGACAGGGGACGCGGTCCCGTGGCTGAGGCGGTTTGATTTCGGAGGGCATGAGAAGGCCATGAAAGAGAATTTCACGCAACTGGATGCTGTGGTTGGGGAATGGTTGGAAGAACACAAAAGGAAAAGGAAATTGAACGGCGAGAAAGGTGAGAAAGGGGGAGATTTCATGGAGTCGATGCTGTCGGATTACAATGGAACTAACATTCATGGGTTTGATTCTGATACTATCATCAAAGCCACGACAATGGCATTGATTTTGGGTGGACCAGATACAAGCTTCGCTAGTAACATGTGGACTCTGTCTTTACTACTGAACAATCCTGGAGCATTGAAGAAAGTAATGGAAGAAATTGACACTCACATTGGGAAAGAGAGACTTGTGACTGAATCAGATACGAACAAGTTGGTGTACCTTCATGCAGTTGTTAAGGAGTCACTAAGGCTATATCCACCCACTCCTCTTAATGCTCCTCGTGAATTCAGAGAAGATTGCAAGCTTGGAGAATACCATGTGAAGAAAGGAACTCGTCTGATCACAAACTTGTGGAAGATCCAAACAGACCCTAAGATTTGGCCAGAGCCTTTGGAGTTCAAGCTTGAAAGGTTCCTCACCACACACAAAGATGTAGATGTAAAGGGAAAACACTTTGAGCTCATCCCTTTTGGAAGTGGTAGGAGGATATGCCCTAGAGTGACCTTTGGCCTTAAAACTTCTTATTTAACTTTGGCAAACTTTCTTCACTGCTTTCATGTCTCTAAATCCTCAACTGAACCTATAGATATGACTTCAGCTGTGGAATTTACCAATGTTAAGGTTACTCCCCTTCAACTTCTCATCAAACCTCGTTTGGCTCCTACTCTTTATGAAAGCATGTAA | 3237 | 0.4242 | MIAEKFYLFELGGVDLILGVSWLATLGEVKTNWKTLTMRFNQDAREVRIQGHPTLTKRVITPEALLKETEIEVVSVVWNMGYTKLEERVDDGEKLQPEQQAELEEILEDFEDIFQEPKGLPPNRLMNHRIPIKVGVDPVNELLDELNGATYFSKVDLKAGYHQIRMEEKDISKTTFCTHQGHYEFLVMSFGLSNAPATFQCLMNTVLRQFLRRCVLVFFDDILIYSNSWEEHRDHLKQVLQTLRQQQLYANKKKCDFGRLQIKYLGHCISRKGVMMDPEKIKAVKEWPEPHNIKDLRGFLGLSGYYRRFIKDYGKIAKPLTDLLRKGQFKWTSKGKAAMQTLKIALTSAPLLALPDFSQIFHVECDASGKEGTEALVLSIQHWGPYLLGKKFVVHTDQRSLRYLLEQRITTQNQKNWLAKLLGYEFEIAYRSGATNKVVDALSRQLEEPETAELELKGISRPFWQDFQEIMGEVQQDIVLQKIITDLDNNPDSHPNFTMEHDRLHYKGTMVLSAKSVWVQKLIAEFHVTQTGGHFGVFRTYRKLAQTLYWIGTKKDVTEFVASCLKYCDQNGVTPKCSFSSHSCTSGSNPAIPLPLPCAPPHQNQRTTHNPRHMADYRPPPPASAVPRHPLPLGHVGGPSWPHLQHQYRHSENRSHQQLGNGERVLQHKRNLPKHDLQPRHARIRTLRNVAFVFVADHRIDTLSHVRISEVRTLAKELYYKWKRGKTEKDFFMVDMTQWLKEVAFNVLLRMVAGKRYFGEKAVVDEEEARICLGMFKEYMRLFGVFMTGDAVPWLRRFDFGGHEKAMKENFTQLDAVVGEWLEEHKRKRKLNGEKGEKGGDFMESMLSDYNGTNIHGFDSDTIIKATTMALILGGPDTSFASNMWTLSLLLNNPGALKKVMEEIDTHIGKERLVTESDTNKLVYLHAVVKESLRLYPPTPLNAPREFREDCKLGEYHVKKGTRLITNLWKIQTDPKIWPEPLEFKLERFLTTHKDVDVKGKHFELIPFGSGRRICPRVTFGLKTSYLTLANFLHCFHVSKSSTEPIDMTSAVEFTNVKVTPLQLLIKPRLAPTLYESM | 1078 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu8g02683 | 1078 | Gene3D | - | 278 | 370 | IPR043128 | - | |
| Vimu8g02683 | 1078 | Pfam | RNase H-like domain found in reverse transcriptase | 331 | 369 | IPR041577 | - | |
| Vimu8g02683 | 1078 | Pfam | RNase H-like domain found in reverse transcriptase | 375 | 424 | IPR041373 | - | |
| Vimu8g02683 | 1078 | Pfam | Cytochrome P450 | 712 | 1050 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu8g02683 | 1078 | Gene3D | - | 482 | 570 | - | - | |
| Vimu8g02683 | 1078 | SUPERFAMILY | Cytochrome P450 | 679 | 1069 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vimu8g02683 | 1078 | FunFam | Cytochrome P450 82C4 | 671 | 1067 | - | - | |
| Vimu8g02683 | 1078 | Gene3D | - | 138 | 269 | IPR043128 | - | |
| Vimu8g02683 | 1078 | ProSiteProfiles | Reverse transcriptase (RT) catalytic domain profile. | 1 | 269 | IPR000477 | - | |
| Vimu8g02683 | 1078 | PANTHER | CYTOCHROME P450 82C3-RELATED | 684 | 1075 | - | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu8g02683 | - | - | gmx:100802193 | 592.038 |
Showing 1 to 1 of 1 entries