Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02680 ATGAAGGGGAGGCACTCTACAACGAGGATATCATCGGTTCGTCTCAAGGCGGACCCAAAAGCTTTGTCTTGTAAGCTTCATGTGCATGACGGCGAGGGACTACATGTGGCGGAGCTAGTCCGCTGTGACGTAGTATATGCGGTTGAGGAGAACAATGGCATAGGTGTTGCATTTCTGGTTCTAATCTCGCCATTCCTCTACCTCTTCCTTGTGCTCCACCGCACCAGAATCAAAGAACCACCCACAATCCCCGGCGCATGGCCGATTATCGGCCACCTCCCCCTGCTAGCGCGGTCTCCCGCCACCCACTACCTCCTGGGCACGTTGGCGGACCGCCATGGCCCCATCTTCAGCATCAATATAGGCACAGTGAAAACCGTAGTCATCAGCAACTGGGAAATGGCGAAAGAGTGCTTCACCACAAACGACGTCGTTGTGTCCTACCGCCCCTACCTTGTTGCCTGCCAAAACATGACCTACAACCTCGCCATGCTAGGATTCGCACCCTATGGACAATTTTGGCGTGACATGAGGAAGAACGTTGCGTTCGTGTTCCTCGCAGACCACCGCATCGACGCGCTCTCACACGTGCGCATCTCCGAGGTGAGAACCTCGGCGAAAGAGCTTTACCACAAGTGGAAACGCGGGAAAACGGAGGAATTTTTTATGGTGGACATGACGCAGTGGCTGAAGGAAGTTGCTTTCAACGTGGTGCTGAGGATGGTTGCCGGGAAGAGGTACTTCGGAGAAAAAGCGGTGGTTGAGGAGAAAGAAGCGCGAATATGTTTGGCGACATTCAAAGAATACATGCGGTTGTTTGGGGTTTTCACGATAGGGGACGCAGTGTCGTGGCTGAGGCGGTTCGATTTCGGAGGGCATGAGAAGGCCATGAAAGAGAATTTCAAGCAATTGGATGCTGTGGTTGGGCAATGGTTGGAAGAACACAAAAGGGAAAGGAAATTGAACGGCGAGAAAGGTGAGAAAGGGGGAGATTTCATGGAGTCAATGCTGTCGGAGTTCGATGGAACCAACATTCATGGGTTTGATTCTGATACTATCATCAAAGCCACGGCAATGGCATTGATTTTGGGAGGAACAGACACAAGCTCCGCTAGTAACATCTGGACTCTGTCTTTGCTACTGAACAATCCTGGAGCATTGAAGAAAGTAATGGAAGAAATTGACACTCACATTGGGAAAGAGAGACTTGTGACTGAGTCAGATACGAACAAGTTGGTGTACCTTCATGCAGTTGTTAAGGAGTCACTGAGGCTATATCCACCCACTCCTCTTAATGCTCCTCGTGAATTCAGAGAAGATTGCAAGCTTGGAGAATACCATGTGAAGAAAGGAACTCGTCTGATCACAAACTTGTGGAAGATCCAAACAGACCCTAAGATTTGGCCAGAGCCTTTGGAGTTCAAGCCTGAAAGGTTCCTTACCACACACAAAGATGTAGATGTAAAGGGAAAACACTTTGAGCTCATCCCTTTTGGAAGTGGTAGGAGGATATGCCCTGGAGTGACCTTTGGCCTTAAAACTTCTTATTTAACTTTGGCAAATTGTCTTCACTGCTTTCATGTCTCTAAATCCTCAACTGAACCTATAGATATGACTTCAGTTGTGGAATTGACCAATGTTAAGGTTACTCCCCTTCAACTTCTCATCAAACCTCGTTTGGCTCCTAGTCTTTATGAAAACATGTAA 1707 0.4845 MKGRHSTTRISSVRLKADPKALSCKLHVHDGEGLHVAELVRCDVVYAVEENNGIGVAFLVLISPFLYLFLVLHRTRIKEPPTIPGAWPIIGHLPLLARSPATHYLLGTLADRHGPIFSINIGTVKTVVISNWEMAKECFTTNDVVVSYRPYLVACQNMTYNLAMLGFAPYGQFWRDMRKNVAFVFLADHRIDALSHVRISEVRTSAKELYHKWKRGKTEEFFMVDMTQWLKEVAFNVVLRMVAGKRYFGEKAVVEEKEARICLATFKEYMRLFGVFTIGDAVSWLRRFDFGGHEKAMKENFKQLDAVVGQWLEEHKRERKLNGEKGEKGGDFMESMLSEFDGTNIHGFDSDTIIKATAMALILGGTDTSSASNIWTLSLLLNNPGALKKVMEEIDTHIGKERLVTESDTNKLVYLHAVVKESLRLYPPTPLNAPREFREDCKLGEYHVKKGTRLITNLWKIQTDPKIWPEPLEFKPERFLTTHKDVDVKGKHFELIPFGSGRRICPGVTFGLKTSYLTLANCLHCFHVSKSSTEPIDMTSVVELTNVKVTPLQLLIKPRLAPSLYENM 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02680 568 PRINTS P450 superfamily signature 364 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS P450 superfamily signature 496 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 498 507 IPR017972 GO:0005506|GO:0016705
Vimu8g02680 568 FunFam Cytochrome P450 82C4 72 557 - -
Vimu8g02680 568 PRINTS E-class P450 group I signature 416 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS E-class P450 group I signature 505 528 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS E-class P450 group I signature 495 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS E-class P450 group I signature 353 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS E-class P450 group I signature 233 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS E-class P450 group I signature 373 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 PRINTS E-class P450 group I signature 457 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 CDD CYP82 114 559 - -
Vimu8g02680 568 PANTHER CYTOCHROME P450 82C3-RELATED 60 565 - -
Vimu8g02680 568 Gene3D Cytochrome P450 74 563 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 Pfam Cytochrome P450 81 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02680 568 SUPERFAMILY Cytochrome P450 81 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02680 Vimu-Chr8 37489096 37498070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02680 60 565 Cytochrome P450 AT4G31940 44.639 3.64e-160 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02680 - - gmx:100802193 784.252