Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02679 ATGGAGTCACTCCAAAATGCTCTTTCTCCTCTCACAGTTGCACTTCTGGTTCTAATCTCGTCATTCCTCTACCTATTCCTTGTGCTCCACCGCACCAGAATCAAAGAACCACCCACAATCCCCGGCGCATGGCCAATTATCGGCCACCTCCCCCTGCTTGCGCGGTCCCCCGCCACCCACTACCTCTTGGGCACGTTGGCGGACTGCCATGGCCCCATCTTCAGCATCAATATAGGCACAGTGAAAACCGTAGTCATCAGCAACTGGGAAATGGCGAAAGAGTGCTTCACCATAAACGATGTCGTTGTGTCCTACCGCCCCTACCTTGTTGCCTGCCAAAACATGACCTACAACCTCGCCATGCTAGGATTCGCACCCTACGGACAATTTTGGTGTGACATGAGGAAGAACGTTGCGTTCGTGTTCCTCGCAGACCACCGCATCGACGCGCTCTCACACATGCGCATCTCCGAGGTGAGAACCTCGGCGAAAGAGCTTTACCACAAGTGGAAACGGGGGAAAACGGAGAAGGACTTTTTTATGGTGGACATGACGCAGTGGCTGAAGGAAGTTGCTTTCAACGTGGTGCTGAGGATGGTTGCCGGGAAGAGGTACTTCGGAGAAAAAGCGGTGGTTGAGGAGGAAGAAGCGCGAATATGTTTGGCGACATTCAAAGAATACATGCGGTTGTTTGGGGTTTTCATGATAGGGGACGCGGTGTCGTGGCTGAGGCGGTTCGATTTCGGAGGGCATGAGAAGCAGCTGGATGCTGTGGTTGGGCAATGGTTGAAAGAACACAAAAGGGAAAGGAAATTGAACGGCGAGAAAGGTGAGAAAGGGGGAGATTTCATGGAGTCAATGATGTCGGAGTTCGATGGAACCAACATTCATGGGTTTGATTCTGATACTATCATCAAAGCCACATCAATGGCATTGATTTTGGGAGGAACAGACACAAGCTCCGCTAGTAACATCTGGACTCTGTCTTTGCTACTGAACAATCCTGGAGCATTGAAGAAAGTAATGGAAGAAATTGACACTCACATTGGGAAAGAGAGACTTGTGACTGAGTCAGATACGAACAAGTTGGTGTACCTTCATGCAGTTGTTAAGGAGTCACTGAGGCTATATCCACCCACTCCTCTTAATGCTCCTCGTGAATTCAGAGAAGATTGCAAGCTTGGAGAATACCATGTGATGAAAGGAACTCGTCTGATCACAAACTTGTGGAAGATCCAAACAGACCCTAAGATTTGGCCAAAGCCTTTGGAGTTCAAGCCTGAAAGGTTCCTCACCACACACAAAGATGTAGATGTAAAGGGAAAACACTTTGAGCTCATCCCTTTTGGAAGTGGTAGGAGGATATGCCCTGGAGTGACCTTTGGCCTTAAAACTTCTTATTTAACTTTGGCAAATTTTCTTCACTGCTTTCATGTCTCTAAATCCTCAACTGAACCTATAGATATGACTTCAGCTGTGGAATTGACCAATGTTAAGGTTACTCCCCTTCAACTTCTCATCAAACCTCGTTTGGCTCCTAGTCTTTATGAAAGCATGTAA 1560 0.4782 MESLQNALSPLTVALLVLISSFLYLFLVLHRTRIKEPPTIPGAWPIIGHLPLLARSPATHYLLGTLADCHGPIFSINIGTVKTVVISNWEMAKECFTINDVVVSYRPYLVACQNMTYNLAMLGFAPYGQFWCDMRKNVAFVFLADHRIDALSHMRISEVRTSAKELYHKWKRGKTEKDFFMVDMTQWLKEVAFNVVLRMVAGKRYFGEKAVVEEEEARICLATFKEYMRLFGVFMIGDAVSWLRRFDFGGHEKQLDAVVGQWLKEHKRERKLNGEKGEKGGDFMESMMSEFDGTNIHGFDSDTIIKATSMALILGGTDTSSASNIWTLSLLLNNPGALKKVMEEIDTHIGKERLVTESDTNKLVYLHAVVKESLRLYPPTPLNAPREFREDCKLGEYHVMKGTRLITNLWKIQTDPKIWPKPLEFKPERFLTTHKDVDVKGKHFELIPFGSGRRICPGVTFGLKTSYLTLANFLHCFHVSKSSTEPIDMTSAVELTNVKVTPLQLLIKPRLAPSLYESM 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02679 519 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 FunFam Cytochrome P450 82C4 29 508 - -
Vimu8g02679 519 PANTHER CYTOCHROME P450 82C3-RELATED 16 516 - -
Vimu8g02679 519 Pfam Cytochrome P450 38 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 SUPERFAMILY Cytochrome P450 38 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02679 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vimu8g02679 519 Gene3D Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02679 Vimu-Chr8 37475490 37477187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02679 4 516 Cytochrome P450 AT4G31940 43.939 2.20e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02679 - - gmx:100802193 768.844