Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02629 ATGGAGATGAAAAGCAGTGAAGAGATTGAGATTGGAAGAGACATAACTCCAACTCTCACTCCTCTCTCTTTCTCTCTCCACAATTCCAATCTCAACACTCACTGCTCCGCCTGTTTCTCTCCTCTTTCCAGCCCTTTTCCGTCCATTCCCACTCCCCTCTTCTACTGTTCTCCTCCCTGCGCCGCCGCCCTTTCCCCTCTCCACAACTCCTCTGCCGAGATCCACCTCCATCCCTCCGCCCATTCCTCCGACCTCCGCGCTGCCCTACGCCTCCTCTGCTCCCACCGCCCCTCCCCCTCCCTCCGCCTCGCCGGCCTCCTCTCCAACCGCCTCATCCTCACCTCTCCTCAAACCCCTTCCCTCTCCCATCACGACGACCATGTATCGGAGCGAATCAAGCTCGGCGCCGCCGCCATGGCCGAAGCCATCTCCGTGCAGCGTGCCGTTCCGAACGACGACGCCGTTTTGGAGGAGGCTACGATTGCGCTATGCGCGGTGCTGACGAACGCCGTAGAGGTGCACGATAACGATGGGCGCGCCCTCGGAATCGCTGTTTTTGATCCCACCTTCTCTTGGATCAACCACAGCTGTTCTCCCAACGCATGCTACCGTTTCGTCCTCTCTTCTCCTCCTTCCTCTTCTCATTCCGATGAACCTGAACTTCTTCGCATTGCTCCGCATCCACAAATGGGTAGTGGTGGGAATTGTGTTAGCAGTAATGAATTTGACAAAGAGGTGCTGGGTTATGGCCCTGGATTGGTTGTGAGGAGTATCAAGAAAATTAAAAAGGGAGAAGAGGTCACTGTAGCCTATACGGATATCTTGCAGCCCAAGGAAACGAGACAGTGGGAGCTATGGTCAAAGTATAGGTTTGTTTGTTGTTGCAAACGATGTAGAGCTCTTCCTTTTTCATACGTGGATCATGCATTGCAAGTAATTTCAGCTTTCTGTTATGATTCAACGGATTCATATTCCAAGTTCCTCAAAGACATGGCTGATAGAAAATTGAGTGAGTGCATTGATGATGTCATATCAGAGTATCTTTCGGTTGGTGATCCTGAGTCTTGTTGTGACAAGCTTGAGAAGATACTCATGCAAGGTCTAAATGAACAGTTAGAATACGTTAAAGGAAAGTCAGATTCTAAGTTCATGCTGCATCCCCTCAACCACCATTCTTTAAAAGCGTACACGACACTGGCTTCAGCGTATAAAGTTTGTGCCAGTGATTTCTTGTCTGTAGATTCTGCAATAGATACAAACCAGTTAAAGGCTTTTGACATGAGCAGGACCAGTGCTGCATATTCGCTGTTACTTGCTGGTGCAACTCATCATCTCTTCAATTCTGAATCCTCACTTATTGTTTCTGTTGCAAATTTTTGGATAGGAGCTGGTGAATCCTTGTTATTCCTAAGCAGAAGTTCTGGATGGGGTGCGTGTGATAATTTGAGTCTGATTGTTCCCAACCATACTTCAGCCATTAAATTCAAATGGTCGAAGTGTTCATTAGTTGATAGGATTAGAACCTGTATAGCAAATGGTCAAATTAACTGTGCCGATTTTGAGAATGTATCAAATGAATTTATTTATTATGTCTCAGATATTACACAGAAAGTATGGGGTTTTCTTATCTCTGATTGCTCTTTTTTGAGATCCTGTAAAGATCCTATTAATTTCAGTTGGCTAATGTCTACCAAAAGCTCCAATAGAATGGATTTTGAGGTTTGCGTTGACAAAAGTTACAAAACTGAGATCAGTTACACCCATGAACCTGAAAACACCATCTATATTTGTGAAGAACCAACCTCCACTGATGATGTATTAGCATGCCTTTTACAGCTTGGTTTACACTGCTTAGCTTATGGGGGATTGTTGGGCAGTATTTGTTATGGTTCCCAGTCTCATGTGGTTTGTCGTGTTCAAAACGTTCTAGACCGTGAAAAGAATACTGTTTTATACTCGTGA 1962 0.4587 MEMKSSEEIEIGRDITPTLTPLSFSLHNSNLNTHCSACFSPLSSPFPSIPTPLFYCSPPCAAALSPLHNSSAEIHLHPSAHSSDLRAALRLLCSHRPSPSLRLAGLLSNRLILTSPQTPSLSHHDDHVSERIKLGAAAMAEAISVQRAVPNDDAVLEEATIALCAVLTNAVEVHDNDGRALGIAVFDPTFSWINHSCSPNACYRFVLSSPPSSSHSDEPELLRIAPHPQMGSGGNCVSSNEFDKEVLGYGPGLVVRSIKKIKKGEEVTVAYTDILQPKETRQWELWSKYRFVCCCKRCRALPFSYVDHALQVISAFCYDSTDSYSKFLKDMADRKLSECIDDVISEYLSVGDPESCCDKLEKILMQGLNEQLEYVKGKSDSKFMLHPLNHHSLKAYTTLASAYKVCASDFLSVDSAIDTNQLKAFDMSRTSAAYSLLLAGATHHLFNSESSLIVSVANFWIGAGESLLFLSRSSGWGACDNLSLIVPNHTSAIKFKWSKCSLVDRIRTCIANGQINCADFENVSNEFIYYVSDITQKVWGFLISDCSFLRSCKDPINFSWLMSTKSSNRMDFEVCVDKSYKTEISYTHEPENTIYICEEPTSTDDVLACLLQLGLHCLAYGGLLGSICYGSQSHVVCRVQNVLDREKNTVLYS 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02629 653 CDD SET_SMYD 147 298 - -
Vimu8g02629 653 PANTHER PROTEIN SET DOMAIN GROUP 41 1 648 - -
Vimu8g02629 653 Gene3D SET domain 135 301 IPR046341 -
Vimu8g02629 653 SUPERFAMILY SET domain 152 296 IPR046341 -
Vimu8g02629 653 Pfam SET domain 187 271 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vimu8g02629 SET 4.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02629 - - gmx:100775193 907.516