Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02614 ATGAAGAGTTTTCTATTGGGATGTGTGGCCATTGTGGAGAAAAATAAACCTTATGTTGCAATGTGTTTTGTTCAGTTTGTGTATTCAGGAATGGCCTTGTTGTCCAAAGCTGCAATCTCCAAGGGAATGAGCCCTTATGTGTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTGCTCTCTCTCCATTTGCTTTCTTTGACAGTAAGCAATCAGCACCTTTGTCATGCAACTTGTTGTGCAAATTGTTCCTAATTTCTCTTGTTGGGTTAACTCTGAGTTCAAACCTTTACTATTTTTCAATCAACTACACCACTGCAACATTTGCTGCAGCCTCCTCAAACACTATCCCTGCCATTACTTTCATCATGGCTCTTTTAATCAGGGTGGAAAGCATTTCCATAAAACGTGCACATGGTATAGCAAAGATTTTGGGGTCTGTTCTGAGCCTTTCTGGGGCAATTACATTTGGTTTAGTGAAGGGACCTCCCCTGAGTTTTATGAAATGGTATCAACAAAACCAGAATCAAACTTCTTCAACAATTGTTCATTACAAAGTTGACATCATTAGAGGCCCTCTCATGATGCTCGCAGCAAACATTACATGGTCCTTGTGGCTTATCTTGCAAGGATTTGTTGTGAAGCAGTACCCTGCAAAACTTCGTCTCACAGCTCTGCAATGCTTCTTCAGCTTCATGCAGTCTACTGTCGTAGCTGTTGCACTTGAGAGGCATAATCTTTCAGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCTGTGGCATACTGTGGTGTAGTTGTAACAGGCATTTGTTATTGGCTGCAAGTCTGCACAATAGAAACCAAAGGCCCAGTTTTCACAGCAATGTTCACTCCTCTTGCTCTTATAATCACAGCAATATTCTCAGCATTATTGTGGAAAGAAACACTTTACTTGGGAAGTGTTGGTGGCACTATTTTACTAGTTGTTGGACTCTATAGTGTCCTGTGGGGGAAGAGCAAGGAGAATGTAAAAGTTGAAAACCTACAACCTCAGCAAACAAAAGAGGAAACCAGATTGGAGTGCATTGTACAGCATTGA 1080 0.4102 MKSFLLGCVAIVEKNKPYVAMCFVQFVYSGMALLSKAAISKGMSPYVFVVYRQAFASVALSPFAFFDSKQSAPLSCNLLCKLFLISLVGLTLSSNLYYFSINYTTATFAAASSNTIPAITFIMALLIRVESISIKRAHGIAKILGSVLSLSGAITFGLVKGPPLSFMKWYQQNQNQTSSTIVHYKVDIIRGPLMMLAANITWSLWLILQGFVVKQYPAKLRLTALQCFFSFMQSTVVAVALERHNLSAWKLGWDIHLLSVAYCGVVVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSALLWKETLYLGSVGGTILLVVGLYSVLWGKSKENVKVENLQPQQTKEETRLECIVQH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02614 359 Pfam EamA-like transporter family 18 150 IPR000620 GO:0016020
Vimu8g02614 359 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020
Vimu8g02614 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Vimu8g02614 359 PANTHER WAT1-RELATED PROTEIN 16 344 IPR030184 GO:0016020|GO:0022857
Vimu8g02614 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02614 Vimu-Chr8 36071285 36075938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02614 16 336 Nodulin-like Gene Family AT2G39510 38.889 2.99e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02614 - - gmx:100800562 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02614 8 36071285 36075938 Vimu8g02614 8 36071285 36075938 ECH