Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02602 ATGGACCACAGTGCCGATGCACAGCGCACGGACTTGATGACTATAACGCGCTTCGTGCTGAACGAGCAATCCAAGCACCCTGAGTCACGTGGCGATTTCACCATCCTTCTCAATCACATTGTTCTAGGCTGCAAGTTCGTTTGCTCCTCGGTTAACAAGGCTGGACTTGCTAAGCTTATTGGACTCGCTGGAGAGACCAATATTCAGGGAGAAGAACAGAAGAAACTAGATGTTCTTTCCAATGAGGTTTTTATCAAGGCTCTTGTAAGCAGTGGCCGAACCTGCATCTTGGTTTCTGAAGAAGACGAAGACGCGATAATTGTGGAGCCTTCTAAGCGTGGAAAGTTGTACTGTGTTGTTTTTGACCCCTTGGATGGCTCGTCTAACATTGATTGTGGGGTTTCCATTGGCACTATTTTTGGAATTTATACATTAGCAGATGTCCATGAACCAACTATAAAGGATGTCCTGCGTCCTGGGAAGAAAATGGTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGCTTGTGTTAAGTACTGGAGCTGGTGTTAATGGTTTCACCCTTGACCCATCTCTTGGTGAATTCATCCTAACTCACCCTGGCATTAAGATTCCAAACAAAGGAAAGATTTATTCAGTTAATGAAGGAAATGCCAAACACTGGGATGGTCCTACTACAGCTTACGTTGAAAAATGCAAGTTTCCAGAAGATGGTTCATCGCCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATGTTCATCGTACATTGCTTTACGGAGGCATCTTTTTGTACCCTGGTGACAAGAAAAATCCAAATGGAAAACTTCGTGTTCTGTATGAAGTCTTCCCAATGTCATTTTTGGTGGAACAGGCAGGAGGGCAGTCTTTCACGGGCAAGGAACGGGCACTTGATTTAATTCCAACGAAGTTGCACGAGCGATCTCCCGTTTTCCTTGGTAGCTATGATGATGTTGAGGAAATCAAAGCGCTTTATGCTGCTGAGGCTAAAGAAGAATGA 1029 0.4441 MDHSADAQRTDLMTITRFVLNEQSKHPESRGDFTILLNHIVLGCKFVCSSVNKAGLAKLIGLAGETNIQGEEQKKLDVLSNEVFIKALVSSGRTCILVSEEDEDAIIVEPSKRGKLYCVVFDPLDGSSNIDCGVSIGTIFGIYTLADVHEPTIKDVLRPGKKMVAAGYCMYGSSCTLVLSTGAGVNGFTLDPSLGEFILTHPGIKIPNKGKIYSVNEGNAKHWDGPTTAYVEKCKFPEDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPGDKKNPNGKLRVLYEVFPMSFLVEQAGGQSFTGKERALDLIPTKLHERSPVFLGSYDDVEEIKALYAAEAKEE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02602 342 PIRSF FBPtase_SBPase 9 341 IPR000146 GO:0005975|GO:0016791
Vimu8g02602 342 PIRSF FBPtase 9 340 IPR028343 GO:0042132
Vimu8g02602 342 ProSitePatterns Fructose-1-6-bisphosphatase active site. 277 289 IPR020548 GO:0005975|GO:0042578
Vimu8g02602 342 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 204 - -
Vimu8g02602 342 CDD FBPase 20 335 IPR000146 GO:0005975|GO:0016791
Vimu8g02602 342 PRINTS Fructose-1,6-bisphosphatase signature 187 210 IPR028343 GO:0042132
Vimu8g02602 342 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Vimu8g02602 342 PRINTS Fructose-1,6-bisphosphatase signature 213 240 IPR028343 GO:0042132
Vimu8g02602 342 PRINTS Fructose-1,6-bisphosphatase signature 156 179 IPR028343 GO:0042132
Vimu8g02602 342 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Vimu8g02602 342 PRINTS Fructose-1,6-bisphosphatase signature 311 336 IPR028343 GO:0042132
Vimu8g02602 342 SUPERFAMILY Carbohydrate phosphatase 8 335 - -
Vimu8g02602 342 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 337 IPR000146 GO:0005975|GO:0016791
Vimu8g02602 342 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 202 IPR033391 -
Vimu8g02602 342 Gene3D - 4 204 - -
Vimu8g02602 342 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 206 335 IPR044015 -
Vimu8g02602 342 Gene3D - 205 342 - -
Vimu8g02602 342 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 337 IPR000146 GO:0005975|GO:0016791
Vimu8g02602 342 FunFam Fructose-1,6-bisphosphatase class 1 205 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02602 Vimu-Chr8 35411961 35417345 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02602 K03841 - gmx:100807451 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02602 8 35411961 35417345 Vimu8g02602 8 35411961 35417345 ECH
Vimu8g02602 8 35411961 35417345 Vimu3g02940 3 43455177 43459109 PCT