Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02594 ATGACCGGCTGCATTGTTGTGGGTTGTCGATCATGGACGAAATTGGGCCTTAGAATTTGGAGAACCATCTTGGGCTTATCCAGCTATCCTCGACCCTTTCCTAAACAATTTCCTCATCCTTACCCCAATCGTGGCCTGGGAAGCCTCTGTGTCCTTTGCCTCGATTGTCGCTTCTGGCGTCGTGGTGCTTTGTTACAGTTCAATATCCCTAACCTCTGTGTTGGAACCCTAGATACTCTGCTCTCTCTCAGTGATGACCTCACCAAGTTGAACAATTTCGTGGAAAGAGTGACGCACAAGATCAAGCGCCAGATTGAGGAGCTCCAAAGAGTTTCTGGTGTGGACAGTGGCGGCGTTATTGTTGACGGTGTCCCTGTGGATTCCTACTTGACTAGGTTTGCTTCCCTTTTTTTGCTGGTTATATTACAGTTTTTCCCTCAATCATTTTACTCTTTCTACTTATATATTCAAATCAATTATAACTTGAAAGCACTTAATCATAAATGGAGAGATTGTCGGCAAGAATTGTGGCAACTAAGAGATGATGGCACGTGTACTAGAGAAGAATTGATTGCCATGGCTCCAGACGGCATAGATAGAGATCATTGGGCTTCTTTTGTTGACTATCGACTTGACGAAAGAACAAAGGAAAAAGAATGTGGGCACAAAGTTAGCAGAGGAGAAGTTTGGATAGCTACCCATAAAAAGACCAACGGAGCTTTTGCCAATGATGAGGCAAGGGAAATTGGTTTGGTAATAGCAACTAGTGACGTGCACTTCATGGGGGTATTTGGCTTGAAAAAAATTCAAGCATATGAATCTACAACACCGTCTCAATCAAAAGAAATATCAAGTTCAGATTCATTGGCTCATGTTTTAGGAAGCCAAGAGCATCGTGGACGTGTTCGCGACCTAGGTTTGGGTCCTTTAGATAAAAATATACATTTACAG 951 0.4301 MTGCIVVGCRSWTKLGLRIWRTILGLSSYPRPFPKQFPHPYPNRGLGSLCVLCLDCRFWRRGALLQFNIPNLCVGTLDTLLSLSDDLTKLNNFVERVTHKIKRQIEELQRVSGVDSGGVIVDGVPVDSYLTRFASLFLLVILQFFPQSFYSFYLYIQINYNLKALNHKWRDCRQELWQLRDDGTCTREELIAMAPDGIDRDHWASFVDYRLDERTKEKECGHKVSRGEVWIATHKKTNGAFANDEAREIGLVIATSDVHFMGVFGLKKIQAYESTTPSQSKEISSSDSLAHVLGSQEHRGRVRDLGLGPLDKNIHLQ 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02594 317 Gene3D - 69 134 - -
Vimu8g02594 317 Pfam V-ATPase subunit C 64 133 IPR004907 GO:0033180|GO:0046961|GO:1902600
Vimu8g02594 317 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 64 134 IPR004907 GO:0033180|GO:0046961|GO:1902600
Vimu8g02594 317 SUPERFAMILY Vacuolar ATP synthase subunit C 59 133 IPR036132 GO:0015078|GO:0033180|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02594 Vimu-Chr8 35140477 35146121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02594 64 133 Primary Pumps ATPases(2) AT1G12840 70.000 9.36e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02594 - K02148 var:108339411 230.72