Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02566 ATGTCATCAAATCAAACATCCCTGAACCGAGCCAAGCTTCCAAACAATGACCTTGAGCAACGTGCAACAACTCTGGAGATCGAAGCCGAGGACACCTTTGACTACTCGAAAAGATCTCAGTGGCTCCGCGCTGCCGTGTTGGGAGCCAACGATGGTTTGGTCTCGACAGCATCTCTGATGATGGGTATTGGAGCTGTGAAGCAAGACCTGAAGGTCATGATCCTATCAGGGTTTGCAGGGTTGGTGGCAGGAGCTTGCAGCATGGCCATAGGTGAGTTTGTGTCTGTGTACTCACAGCTTGACATAGAGGTTGCCCAGATGAAGAGAGAAAGAGAAAGGATGTCTGGTAGTGACAGAGAAGGAGTAGTAGAAGATACCAATGAAGAAGAGAAAGAGGGTTTGCCAAATCCTTTGCAGGCTGCAGCAGCATCAGCTTTAGCTTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCCTCCTTTATAAGGGAATTTAGGGTGAGGATTGGGGTGGTTGTGGCTGCCGTGACCGTTGCTTTGGTGGTGTTTGGTTGGTTAGGGGCTGTGTTGGGTAAGGCTCCAGTGTTGAGATCTTCTTTGAGGGTCTTGTTTGGGGGTTGGATGGCCATGTCCATCACTTTTGGTCTAACCAAGTTGATTGGTTCAAGTGGACTCTAG 678 0.4926 MSSNQTSLNRAKLPNNDLEQRATTLEIEAEDTFDYSKRSQWLRAAVLGANDGLVSTASLMMGIGAVKQDLKVMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRERERMSGSDREGVVEDTNEEEKEGLPNPLQAAAASALAFSVGAMVPLLAASFIREFRVRIGVVVAAVTVALVVFGWLGAVLGKAPVLRSSLRVLFGGWMAMSITFGLTKLIGSSGL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02566 225 MobiDBLite consensus disorder prediction 111 132 - -
Vimu8g02566 225 CDD Nodulin-21 40 194 - -
Vimu8g02566 225 MobiDBLite consensus disorder prediction 111 134 - -
Vimu8g02566 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 220 IPR008217 GO:0005384|GO:0030026
Vimu8g02566 225 Pfam VIT family 42 117 IPR008217 GO:0005384|GO:0030026
Vimu8g02566 225 Pfam VIT family 129 217 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02566 Vimu-Chr8 34788231 34789495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02566 15 225 Nodulin-like Gene Family AT3G43660 70.616 3.99e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02566 K22736 - gmx:100802179 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02566 8 34788231 34789495 Vimu3g02946 3 43503682 43504263 PCT