Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02558 ATGGAGCTGATCAATTTGCTGCTCTCACTGATCCTTTCAGTGTTGGTGTTATCAGTGCTGTTCTTGTTGTATCAAACTCGTTCTCCTAAAGCAATGGAAGGCATCCCTGGAAGCCTTGGTTGGCCAATTGTGGGAGAGAGCTTCTCATTCCTCTCTGACTTTTCAAGTCCCTCTGGGATCTTTAGCTTCATGATCAAGAGGCAAAAGAGATATGGAATGGTTTTCAAGAGCTTTGTCTTGGGGAGGTTTACTATCTTCATGACAGGGAGGGAAGCAAGTAAGATATTGTTAACTGGCAAGGATGGTATTGTGAGTTTGAATCTGTTTTACACTGGCCAGCAAGTCCTGGGCCCCACCAGCTTGCTGCAAACCACAGGGGAGGCTCACAAAAGGCTAAGAAGGCTGATTGGTGAACCTTTATCAATTGATGGACTGAAGAAATATTTCCATTTTATCAACACTCAGGCAATGCAGACATTAGATCAATGGGAAGGAAGGAAAGTCCTTGTTCTTGAAGAGGCTTCTACATTTACTTTAAAAGTGATTGGACACATGATCATGAGTTTAGAGCCTTCTGGGGAGGAGCAAGAAAAGTTTAGATCAAATTTTAAGATTATTTCTTCCTCATTTGCATCGTTGCCATTTAAACTTCCAGGGACAGCTTTTCATCGTGGCATCAAGGCTCGAGATAGGATGTATGAGATGTTGGATTCTACAATTTTGAGGAGGAGAAGTGGCCAAGACTTTCAACAGGATTTCTTAGGATCCTTAGTTATGAAACACAGCAAAGAAGATGGAGAAGAAGATGAAAATAAACTCACAGATAAACAATTGAAGGATAATATATTAACTCTGCTGGTTGCAGGCCATGATACCACAACTGCTGCTCTTACATGGCTCATAAAATTTCTTGCTGAGAATCCGATTGTTTTGGAAAAACTGAGAGAGGAACATAGACAAATTGTGGCCGAAAGAAAGATTGGAACAGATCTTACCTGGGCAGAAGCTAATAACATGCCTTACACATTCAAAGTCATCAGTGAAACTCTTCGAAGAGCCACAATACTACCTTGGTTTTCAAGAAAGGCATCCCAGGATTTTGAAATTGATGGTTATAAAATTAAGAAAGGCTGGTCCGTCAACCTAGATGTTGTTTCCATACACCATGACCCAGAAGTTTTCCCAGATCCTGAAAAGTTCGATCCCTCAAGATTCGATGAACCCGTGAGGCCTTTCAGCTTTCTTGGATTTGGTAGTGGACCACGTATGTGTCCTGGAATGAACCTTGCCAAGCTTGAAATTTGTGTCTTCATCCATCACCTTGTCAACAGATACAAGTGGAGACCTCTGGAGAATGAGAATTCTGTCCAACCAACGCTTGTAAGGATGCCAAAGAACAAATATCCTATTATGGTTGAGTCACTGTAA 1428 0.4153 MELINLLLSLILSVLVLSVLFLLYQTRSPKAMEGIPGSLGWPIVGESFSFLSDFSSPSGIFSFMIKRQKRYGMVFKSFVLGRFTIFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQTTGEAHKRLRRLIGEPLSIDGLKKYFHFINTQAMQTLDQWEGRKVLVLEEASTFTLKVIGHMIMSLEPSGEEQEKFRSNFKIISSSFASLPFKLPGTAFHRGIKARDRMYEMLDSTILRRRSGQDFQQDFLGSLVMKHSKEDGEEDENKLTDKQLKDNILTLLVAGHDTTTAALTWLIKFLAENPIVLEKLREEHRQIVAERKIGTDLTWAEANNMPYTFKVISETLRRATILPWFSRKASQDFEIDGYKIKKGWSVNLDVVSIHHDPEVFPDPEKFDPSRFDEPVRPFSFLGFGSGPRMCPGMNLAKLEICVFIHHLVNRYKWRPLENENSVQPTLVRMPKNKYPIMVESL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02558 475 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 Gene3D Cytochrome P450 25 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 SUPERFAMILY Cytochrome P450 30 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 FunFam Cytochrome P450 family 722 subfamily A polypeptide 1 25 475 - -
Vimu8g02558 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Vimu8g02558 475 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 CDD CYP90-like 67 473 - -
Vimu8g02558 475 Pfam Cytochrome P450 36 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02558 475 PANTHER CYTOCHROME P450 26 32 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02558 Vimu-Chr8 34687959 34690334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02558 1 455 Cytochrome P450 AT5G45340 36.659 3.36e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02558 - - gmx:100810666 871.692