Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02557 ATGGAAGGGAAAGCTGAGATTGTATCTAAGGAAACAATAAAGCCATCTTCTCCAACATCCAATAAGCTTTTCAAACTCTCTCTCCTCGATCAATTGGCTCCTCCATTTTACGTTCCTATTCTCCTCTTTTACTCTGCTTCCGATGCCACACACAACAAACCAATATCTCACAAATTGAAGGCTTCTTTATCACAAGTCCTCACTCTCTATTACCCCTTTTGCGGAACCCTCAGAGACAACTCAACCGTTGAGTGCAACGATGAGGGCGTTGTTTTCACCGACTGTAGAGTCCCCATGGAACTCTCAAGCCTTCTTAAAAACCCTGACCTTTACCATATTAACCACCTTTTCCCATGCGATCCCTTCAACCCTGCATGGGAAACTCTAACTGGGAACATGGCAGTTCAGTTCAACCACTTCACCTGTGGAGGTTTTGCGCTCGGCGTCTGCTTCTCACACAAGATCGCTGATGCTTCCACAGCAGCATCCTTCCTCACTGCTTGGGCTGCAACATCAAGAGGCAACAAACCGATACTACCACAAATGGAAGAAGGCGCACAGGTTTTTCCGCCCAGGAAGATAGAAATGGACTTGATTGGTGGCATGATGGGCGACAAAAGCATTGTCACAAAGAGGTTTGTGTTCAACAGGACCAACATATCTAGACTGAAGCAAAAGCTGGGGAGCTTGGATTTCACTCCCACTAGTGTGGAAGCCGTGACAGCACTGATATGCAAATCATCACTGGAAGCGGCGAAAGCAAGTTCAGAGGAAGGAAAATTTCCGGCATCTATGGTATCCCACGCGGTGAACATTCGCAGCAGAATGGCCCAAACGCTGTCGGAGCATTCGATAGGAAATCTGTCGCAAGCAGCATTTTCTCCGGTGGTGGAGGTGGAAGGAGAATTGGGGCTTCGTGATTTGTGCGAGAGAGTGAGGAAAACTGTAAGAAAAATTGATGGAAATTATGTGAGTAAGCTTCAGGGTGATGATATTTATAAGGTGATGGAGTCTTTGAAGGAAGTAAGAACAATGAGCTTTAGCAGTTGGGTGAGATTTGGATTCTATGAAACGGATTTCGGATGGGGAAAACCAAGTTACGTGCGCACTATCGGAGTGCCTATAAAAAACGTGGTGATTTTGATGGGTACTAAGGTTGGTGATGGCATGGAGGCATGGATAACCTTGACTACGCGTGACATGGTTGGAGCTGAGAACGCAATAAGTGGAAGAACCAGTGTGGAGAACCCAAGAAGTGGAGCTGATAACCCAAGAAGTAGAGCTGATAGAGAACGCGAGAACCATGGGTGCCACTTAATCGGAGGTGGACGTCATCTTCGGAAGAAAGAAGTTGTTATCTTCTACCGAAAGATAGACGATACCTGGAACACTCCAGAAGATAGACAAAACAACTCATTTAGTGGGGAAATACCGGCTGGATTAGTGTCTGAAAAAATTGTTTTTAGTACTGGTGATCCTGTTACTATTATTCTTACTAAGTTTGGTGGTATTGCTCAATACGCGGAGAAAGACATCTCAAAAGAAACACAACTCAAAACAAACGTGAGGAAAAACGTGCATGGACTGAAGATCTCCCTCGGTTGCTTATCCAGCTTGGAGATAATGACCTAG 1632 0.4534 MEGKAEIVSKETIKPSSPTSNKLFKLSLLDQLAPPFYVPILLFYSASDATHNKPISHKLKASLSQVLTLYYPFCGTLRDNSTVECNDEGVVFTDCRVPMELSSLLKNPDLYHINHLFPCDPFNPAWETLTGNMAVQFNHFTCGGFALGVCFSHKIADASTAASFLTAWAATSRGNKPILPQMEEGAQVFPPRKIEMDLIGGMMGDKSIVTKRFVFNRTNISRLKQKLGSLDFTPTSVEAVTALICKSSLEAAKASSEEGKFPASMVSHAVNIRSRMAQTLSEHSIGNLSQAAFSPVVEVEGELGLRDLCERVRKTVRKIDGNYVSKLQGDDIYKVMESLKEVRTMSFSSWVRFGFYETDFGWGKPSYVRTIGVPIKNVVILMGTKVGDGMEAWITLTTRDMVGAENAISGRTSVENPRSGADNPRSRADRERENHGCHLIGGGRHLRKKEVVIFYRKIDDTWNTPEDRQNNSFSGEIPAGLVSEKIVFSTGDPVTIILTKFGGIAQYAEKDISKETQLKTNVRKNVHGLKISLGCLSSLEIMT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02557 543 PANTHER F21J9.9 6 406 - -
Vimu8g02557 543 Pfam Transferase family 5 405 - -
Vimu8g02557 543 MobiDBLite consensus disorder prediction 407 439 - -
Vimu8g02557 543 Gene3D - 205 409 IPR023213 -
Vimu8g02557 543 Gene3D - 3 197 IPR023213 -
Vimu8g02557 543 MobiDBLite consensus disorder prediction 422 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02557 Vimu-Chr8 34639346 34641948 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02557 4 401 Monolignol Biosynthesis Gene Families AT5G48930 23.198 8.84e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02557 - K13065 gmx:100792323 570.852