Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02553 ATGGAAGTGAAAGCTGAGATTGTATCTAAGGAAACAGTAAAGCCATCTTCTCCAACATCCAATAAGCTTTTCAAACTCTCTCTCCTCGATCAATTGGCTCCTCCATTTTACGTCCCTATTCTCCTCTTTTACTCTGCTTCCGATGCCACACACAACAAACCAATATCTCATAAATTAAAGGCTTCTTTATCACAAGTTTTCACTCTCTATTACCCCTTTTGCGGAACCCTCAGAGACAACTCAACCGTTGAGTGCAACGATGAGGGCGTTGTTTTCACCGACTGTAGAGTCCCCATGGAACTCTCAAGCCTTCTTAAAAACCCTGACCTTTACCATATCAACCACCTTTTCCCATGCGATCCCTACAACCCTGCAAGGGAAACTCTCACTGGGAGCATGGCAGTTCAGTTGAACCACTTCACCTGTGGAGGTTTTGCGCTCGGCGTCTGCTTCTCACACAAGATCGCTGATGCTTCCACAGCAGCATCCTTCCTCACTGCTTGGGCTGCAACATCAAGAGGCAACAAACCGATACTACCACAAATGGAAGAAGGCGCACAGGTTTTTCCGCCGAGGAAGATAGAAATGGACTTGATTCGTGGCATGATGGGCCAAAAAAGCATTGTCACAAAGCGGTTTGTGTTCAACAGGACGAACATATCCAGACTGAAGCAAAAGCTGGGGAGCTTCGATTTCACTCCCACTAGTGTGGAAGCCGTGACATCACTGATATGGAAATCATCACTGGAAGCGGCGAAAGCAAGTTCAGAGGAAGGAAAAATTCCGGCATCTATGGTATCCCACGCGGTGAACATTCGCAGCAGAATGGCCCAAACGCTGTCGGAGCATTCGACGGGAAATCTGTGGCAACAAGCAGTGTCTCCGGTGGTGGAGGCGGAAGGAGAACTGGGGCTTCGTGATTTGTGCGAGAGAGTGAGGGAAACGATAAGAAAAATGGATGGAAATTATGTGAGTAAGCTTCAGGGTGATGAATTTTTTAAGGTGATGGAGTCATTGAAGGAAGCAAGAAGAATGGCCGCAGAAAAGGGTGTTCCATGTTACAGCTTTAGCAGTTGGATGAGATTTGGGTTCTATGAAACGGATTTCGGATGGGGAAAACCAAGTTACGTGCGCACTATCGGAGTGCCTATAAAAAACGTGGTGATTTTGATGGGTACTAAGGTTGGTGATGGCATGGAGGCATGGATAACCTTGACTTCGCGTGACATGCTGCAATTTGAGCAAAATCCAGAACTTCTCGAATTTCTTTCGTTTGATTCTCAATGA 1287 0.4646 MEVKAEIVSKETVKPSSPTSNKLFKLSLLDQLAPPFYVPILLFYSASDATHNKPISHKLKASLSQVFTLYYPFCGTLRDNSTVECNDEGVVFTDCRVPMELSSLLKNPDLYHINHLFPCDPYNPARETLTGSMAVQLNHFTCGGFALGVCFSHKIADASTAASFLTAWAATSRGNKPILPQMEEGAQVFPPRKIEMDLIRGMMGQKSIVTKRFVFNRTNISRLKQKLGSFDFTPTSVEAVTSLIWKSSLEAAKASSEEGKIPASMVSHAVNIRSRMAQTLSEHSTGNLWQQAVSPVVEAEGELGLRDLCERVRETIRKMDGNYVSKLQGDEFFKVMESLKEARRMAAEKGVPCYSFSSWMRFGFYETDFGWGKPSYVRTIGVPIKNVVILMGTKVGDGMEAWITLTSRDMLQFEQNPELLEFLSFDSQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02553 428 Pfam Transferase family 4 419 - -
Vimu8g02553 428 PANTHER F21J9.9 6 424 - -
Vimu8g02553 428 Gene3D - 1 197 IPR023213 -
Vimu8g02553 428 Gene3D - 205 421 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02553 Vimu-Chr8 34568760 34570163 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02553 3 415 Monolignol Biosynthesis Gene Families AT5G48930 23.636 1.97e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02553 - K13065 gmx:100792323 639.417