Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02509 ATGCATCGTGGCCCTCCACCACAAGATCTTCCCTGGCCTTCCCGTACTGGAACGGCACCGCCGGCTCTATCCTCATCACCTCGAGACTTCGAAGTAGCAGCATCAGATGATTCTGAGCTTGCAGGCACAGAAGGGGAAGAAACCCCATTTGTTGACACACGGTTGGTCAAAGAAGAGGCTAGATTGAAGACTAAAAGTGTTGCTGGGATTGTTTTGAAGCAAAAGCAGGAAGTGGTGACAAAATCTGCTGCCGATATTCTACACGATCAACATAGAGAGCATTATTCTTGTCTTTTTGTTTCATTTCAAATTGTTCTGAGATTTAATGGGTGCGTTACGAACAAAGGAAACATGCGTACCTATAAGAATGCTAGGGGTGAAGGTTGTGTATTCAATGTTGAATTGACGGACGAAGAAGGGTTGATATCCCCCCCTAATTTCAGGGTACTCAGATCCAGGCAACCATGTTTAGCTGAGCTACTTCTAGGACAGACTGCTGAGGAGGCCATGACACCAATTGAATCTACATTTTCCTTGGATTTGGCTTCCAAATTGGACTGGTGCGTTTTTTCCTATTGGCTTTTCTGGTCAGATCAATGTGATATGGTGAAAAATGCCAACTTTTTTGGCCAGACTAGAGGTACAGCAACTGGAATGAGGTATACTTCTAGAATTGCAGCTTATAAAGTATGCTGGTCTTCTGGTTTGCGTGGAGTATCATTTATATTTTCTGCTGACAATGTGCTACAGATGATAATGTTGGAAGGTGCCAAGGCTACCACTGAAACAGTTGATGCATTGAGAATTGGTAGTTATAAAGGTAAAGAGAAAGAAGTGTCACAGGAGAGAGAAGAACTAAATAATGAGAGAGAAAAAGTGTCTTCGTATGGTCGTCTAGCTAGTGAGCTGGTCACTAAGACGCAAGTGAGTTGGTCACTTGGCCGCCCGGACTTGCTATTGAGATGGTCACTAGAAGCCCATGTTAGTGTCTTCGAATGGCCATCCGGCTAA 1011 0.4411 MHRGPPPQDLPWPSRTGTAPPALSSSPRDFEVAASDDSELAGTEGEETPFVDTRLVKEEARLKTKSVAGIVLKQKQEVVTKSAADILHDQHREHYSCLFVSFQIVLRFNGCVTNKGNMRTYKNARGEGCVFNVELTDEEGLISPPNFRVLRSRQPCLAELLLGQTAEEAMTPIESTFSLDLASKLDWCVFSYWLFWSDQCDMVKNANFFGQTRGTATGMRYTSRIAAYKVCWSSGLRGVSFIFSADNVLQMIMLEGAKATTETVDALRIGSYKGKEKEVSQEREELNNEREKVSSYGRLASELVTKTQVSWSLGRPDLLLRWSLEAHVSVFEWPSG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02509 336 Coils Coil 269 292 - -
Vimu8g02509 336 Gene3D - 102 145 IPR012340 -
Vimu8g02509 336 Gene3D Peptidase S8/S53 domain 202 242 IPR036852 GO:0004252|GO:0006508
Vimu8g02509 336 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02509 Vimu-Chr8 33784368 33793892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02509 59 140 Core DNA Replication Machinery Family AT5G08020 47.368 4.56e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02509 K07466 - sspl:121759960 87.0409