Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02503 ATGGCCAAACTAGTGTTCTACTCTTCAACTCTTTTCTTCCTTATCTTCTTAACCCTTATAGTGAGAAAAATAGCAAACAAAAAGAAGAAAGCTGAGGAAACACCTTATAACATGCCCCATGGACCTAGAAAGCTACCTATTATAGGAAATATGCACAATATGTTATGTTCTCTGCCCCATAGAAAATTAAGAGATCTGGCCTTAAAATATGGACCCTTGATGCATCTTCAACTTGGAGAGGTTTCTACCATTGTCATTTCATCCCCTGAGTGTGCTAAGGAAGTGATGAAAACCCATGATATTAACTTTGCCACAAGGCCCAAAGCCCTAGCTATTGATGTAATCAATTACAACTGCACAAACATTGCTTTTGCTCCTTATGGAGATTATTGGAGGCAACTAAGAAAAATTTGCGCATTAGAGCTTTTAAGCCTAAAACGTGTCAACTCATACCAGCCAATCAGAGAAGAAGAGCTCTTCAATCTTTTCAAATGGATAGATGCGCAGAAAGGATACCCCATTAACCTCACTGAAGCTGTACTTTCATCAATTTATGCAATTGTTTCAAGGGCTGCCTTTGGCGAGAAATTCAAAGACCATGAAAAATTTATATCAGTGATTAACAAAATAACCAAAGTTGCTGGAGGTTTTTACATTGGAGATTTCTTTCCTTCTGTTGTTTGGTTGCAACATGTCACTGGCATGAGGCATAAGCTCGAGAGGGTGCATCAAGAAGCTTATCAGATAATGGAAAACATCATCAATGAGCATAAGGAGACAAAGTCTAAGGCCAAAGGTGACCAGAGGGAAGCAACAGATCTTCTGGATGTTCTCATTCATTATGAAGATGGCAGTCAACAAGATTTTTCTTTAACTAGGAACGACATCAAGGCAATAATTCTGGACATTTTTGGTGGCGGTGGCGAAACATCATCAACAACCATAGATTGGGCGATGGCTGAAATGATGAAGGATTCAAGAATAATGAAAAAAGCACAAGCTGAGGTTAGAGAGGTATTCAACATGAAAGGAAGGGTTGATGAAAATTTCCTCGATGAACTCAAATATTTGAAAGTAGTTGTGAAAGAGACCTTGAGATTACACCCTCCAACTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACATGTGAGATAAATGGCTATCACATACCTGCCAAAAGCAAAGTCATAGTCAATGCTTGGGCAATTGGAAGAGATTCAAACTATTGGACCGAACCAGAGAGGTTTTATCCCGAGAGATTCATTGATAGCAGTATTGACTACAAGGGGAGTAATTTTGAATACATTCCTTTTGGAGGTGGAAGAAGGATGTGCCCAGGCAGCACATTTGCTATTAGAAATCTTGAACTTGCCCTGGCAATGTTGTTGTATCACTTTGATTGGAAACTTCCCAATGGAATCACAAGTGAAGAATTGAACATGAGTGAGGTGTTTGGGCTCACAATGAGAAGAAAAGATGACCTATACCTGGTCCCTTTTCCTTATCATCCTTTGCCTGTCATATGA 1527 0.3936 MAKLVFYSSTLFFLIFLTLIVRKIANKKKKAEETPYNMPHGPRKLPIIGNMHNMLCSLPHRKLRDLALKYGPLMHLQLGEVSTIVISSPECAKEVMKTHDINFATRPKALAIDVINYNCTNIAFAPYGDYWRQLRKICALELLSLKRVNSYQPIREEELFNLFKWIDAQKGYPINLTEAVLSSIYAIVSRAAFGEKFKDHEKFISVINKITKVAGGFYIGDFFPSVVWLQHVTGMRHKLERVHQEAYQIMENIINEHKETKSKAKGDQREATDLLDVLIHYEDGSQQDFSLTRNDIKAIILDIFGGGGETSSTTIDWAMAEMMKDSRIMKKAQAEVREVFNMKGRVDENFLDELKYLKVVVKETLRLHPPTPLLLPRECGQTCEINGYHIPAKSKVIVNAWAIGRDSNYWTEPERFYPERFIDSSIDYKGSNFEYIPFGGGRRMCPGSTFAIRNLELALAMLLYHFDWKLPNGITSEELNMSEVFGLTMRRKDDLYLVPFPYHPLPVI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02503 508 SUPERFAMILY Cytochrome P450 39 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 Gene3D Cytochrome P450 31 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 Pfam Cytochrome P450 39 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 CDD CYP71-like 69 495 - -
Vimu8g02503 508 FunFam Cytochrome P450 71D8 31 499 - -
Vimu8g02503 508 PANTHER OS08G0105600 PROTEIN 62 504 - -
Vimu8g02503 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vimu8g02503 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02503 508 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02503 Vimu-Chr8 33706744 33708813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02503 11 499 Cytochrome P450 AT3G26310 42.339 9.91e-139 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02503 - - gmx:100778572 813.527