Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02497 TTGAATTTTTCCATCAGTGTTTCTTCATCAGACCTTGTTTCAAAGTGGATGGGTGAAAGTGAAAAGTTGGTTTCAAATCTTTTCGAAATGGCTCGAGAAAGTGCCCCATCCATCATATTCATTGATGAAATAGATTCCTTATGTGGTCAGCGTGGGGAAGGCAATGAGAGCAAAGCTTCAAGACGAATTAAAACAGATCTTCTGGTTCAGATGCAGGGTGTAGGGCACAATGATCAGAAAGTTCTTGTTCTTGCATCAACAAATACACCCTATGCCTTAGACCAGGCAATGAGGCGAAGATTTGTTAAGCGCATATATATTCCACTACCAGATTTGAAGGCTCGCCAACACATGTTCAAGGCAAGCTTAATAAATGAGCAGGTGCATCTGGGAGATACTCCTAATAACTTGACTGAAAGTGATTTTGAGTACTTGGTAAAAGATGTGTTATTTGAACCTGTTCGCAAAACCCAAGATGCAATGTTCTTCTTTAAAAATCCCGAGGGTATGTGGATCCCGTGTGGACCAAAGCAACAGGGTTCTGTACAAACCACAATGCAGGATCTTGCTACAAAAGGACTTGCTTCTAAGGTATTTAATGCGTATTGTCTTTTATGGTAG 621 0.4058 MNFSISVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTDLLVQMQGVGHNDQKVLVLASTNTPYALDQAMRRRFVKRIYIPLPDLKARQHMFKASLINEQVHLGDTPNNLTESDFEYLVKDVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQQGSVQTTMQDLATKGLASKVFNAYCLLW 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02497 206 PANTHER AAA DOMAIN-CONTAINING 6 176 - -
Vimu8g02497 206 Pfam ATPase family associated with various cellular activities (AAA) 5 109 IPR003959 GO:0005524|GO:0016887
Vimu8g02497 206 Gene3D - 111 196 - -
Vimu8g02497 206 Gene3D - 5 110 IPR027417 -
Vimu8g02497 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 149 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02497 Vimu-Chr8 33549924 33551171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02497 1 159 Calmodulin-binding Proteins AT3G56690 31.361 2.57e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02497 K12196 - gmx:100788150 337.806