Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02473 ATGTTACATGCATCAAATAATGTTATCTCTCAGCCTGCATCACACCGGTTATCTCAGCAGGGTGCCATAACAAAGAGAATGACTGTCATTGAAGAGATAGCTCGAATGGATGTGTTATGCAGTGACAAGACAAGCACATTAACTCTTAACAAGCTTTCAGTGGACAAGAATATTTTTCAGGTTTTTGTTGAAAACGTTGATAGTGATATGGTTATACTTATGGCCGCAAGAGCAGCAAGGCAAGAGAACCAGGACGCAATTGATGGTGCTATAGTTTCAATGTTAGCATACCCAAATGAGGCGAGAGCTGGAATAAAAGAAGTTCCCTTCCTTCCATTCAATCCAACTCATAAAAGAACTGCAGTAACATACCTTGATGTTGCTGGTAAGATGCACAGGGTTAGCAAAGGAGCTCTAGAGCAGGTAGTACATAATCCAAAAGCTCGTGAGGCTGCATGGGCTACTGAGCACAGAACCTTACATGGCCTTCACTCTGTTGACCCAAAAGGGTTTACAGATAAGCACACCTTCAGAGAAATTAATACATTGGCAGAAGAGGCAAGGACAAGAGCAGAGATACCAAGGCTGAGAGAGCTTCACATTCTAAAAGGTAGAGTGGAATCATTTTTTCTGACAGAAACACTTAAAATAACTAATCGCTTTGATCTTAAAGCAGTAAATGAGACTTTCAACACAAATGTCTTAATACTTCCATAA 717 0.4045 MLHASNNVISQPASHRLSQQGAITKRMTVIEEIARMDVLCSDKTSTLTLNKLSVDKNIFQVFVENVDSDMVILMAARAARQENQDAIDGAIVSMLAYPNEARAGIKEVPFLPFNPTHKRTAVTYLDVAGKMHRVSKGALEQVVHNPKAREAAWATEHRTLHGLHSVDPKGFTDKHTFREINTLAEEARTRAEIPRLRELHILKGRVESFFLTETLKITNRFDLKAVNETFNTNVLILP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02473 238 Gene3D - 13 36 - -
Vimu8g02473 238 Gene3D - 52 151 IPR023299 GO:0000166
Vimu8g02473 238 Gene3D - 175 221 - -
Vimu8g02473 238 PANTHER CALCIUM-TRANSPORTING ATPASE 13 148 - -
Vimu8g02473 238 Gene3D - 37 51 IPR023214 -
Vimu8g02473 238 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 46 144 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02473 Vimu-Chr8 33173971 33175604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02473 149 217 Primary Pumps ATPases AT5G62670 53.623 3.94e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02473 K01535 - vra:111242281 386.341