Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02402 ATCAAAGAACCACCCACAATCCCCGGCGCATGGCCGATTATCGGCCACCTTCCCCTGCTAGCGCGGTCCCCCGCCACCCACTACCTCTTGGGCACGTTGGCGGACCGCCATGGCCCCATCTTCAGCATCAATATAGGCACAGTGAAAACCGTAGTCATCAGCAACTGGGAAATGGCGAAAGAGTGCTTCACCACAAACGATGTCGCTGTGTCCTACCGCCCCTACCATGTGGCCTGCGAAAACATGACCTACAACCTCGCCATGCTCGGATTCGCACCCTACGGGCAATTTTGGCGTGACATGAGGAAGAACGTTGCGTTCGTGTTCCTCGCAGACCACCGCATCGACGCGCTCTCACACGTGCACATTTCCGAGGTGAGAACCTCGGAGAAAGAGCTTTACTACAAGTGGAAACGTGGGAAAACAGAGAAGGACTTTTTTATGGTGGACATGACGCAGTGGCTGAAGGAAGTTGCGTTCAACGTGCTGCTGAGGATGGTTGCCGGGAAGAGGTACTTCGGAGAAAAAGCGGTGGTTGACGAGGAAGAAGCGCGAATATGTTTGGGGATGTTCAAAGAATACATGCGGCTATTTGGTGTTTTCACGACAGGGGACGCGGTCCCGTGGCTGAGGCGGTTCGATTTCGGAGGGCATGAGAAGGCCATGAAAGAGAATTTCACGCAGCTGGATGCTGTGGTTGGGGAATGGTTGGAAGAACACAAAAGGAAAAGGAAATTGAACGACAAGAAAGGTGAGAAAGGGGGAGATTTCATGGAGTCGATGCTGTCGGATTACAATGGAACTAACATTCATGGGTTCGATTCTGATACTATCATCAAAGCCACGACAATGGCATTGATTTTGGGTGGACCAGACACAAGCTTCGCTAGTAACATCTGGACTCTGTCTTTACTACTGAACAATCCTGGAGCATTGAAGAAAGTAATGGAAGAAATTGACACTCACATTGGGAAAAAGAGACTTGTGACTGAATCAGATACGAACAAGTTGGTGTACCTTCATGCAGTTGTTAAGGAGTCACTAAGGCTATATCCACCCACTCCTCTTAATACTCCTCGTGAATTCAGAGAAGATTGCAAGCTTGGAGAACACCATGTGAAGAAAGGAAGTCGTCTGATCACAAACTTGTGGAAGATCCAAACAGAAAAAATAATTAAAAGTTTATTTGGTTTTAAAAATGTAATTACAAAAATGAGAGGTGAAACCAGATTTATGAAGAAATGGAATATTTTGAAGATGTAA 1263 0.4735 IKEPPTIPGAWPIIGHLPLLARSPATHYLLGTLADRHGPIFSINIGTVKTVVISNWEMAKECFTTNDVAVSYRPYHVACENMTYNLAMLGFAPYGQFWRDMRKNVAFVFLADHRIDALSHVHISEVRTSEKELYYKWKRGKTEKDFFMVDMTQWLKEVAFNVLLRMVAGKRYFGEKAVVDEEEARICLGMFKEYMRLFGVFTTGDAVPWLRRFDFGGHEKAMKENFTQLDAVVGEWLEEHKRKRKLNDKKGEKGGDFMESMLSDYNGTNIHGFDSDTIIKATTMALILGGPDTSFASNIWTLSLLLNNPGALKKVMEEIDTHIGKKRLVTESDTNKLVYLHAVVKESLRLYPPTPLNTPREFREDCKLGEHHVKKGSRLITNLWKIQTEKIIKSLFGFKNVITKMRGETRFMKKWNILKM 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02402 420 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02402 420 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02402 420 PRINTS E-class P450 group I signature 158 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02402 420 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02402 420 PRINTS E-class P450 group I signature 34 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02402 420 Pfam Cytochrome P450 5 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02402 420 SUPERFAMILY Cytochrome P450 5 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02402 420 Gene3D Cytochrome P450 2 392 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02402 420 PANTHER CYTOCHROME P450 82C3-RELATED 4 389 - -
Vimu8g02402 420 FunFam Cytochrome P450 82C4 1 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02402 Vimu-Chr8 31506743 31508223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02402 5 389 Cytochrome P450 AT4G31940 45.918 2.14e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02402 - - gmx:100802193 584.334