Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02373 ATGTCAGAGAATATAGACTTGAATGGAGATTCTGAGAGGAAGCAAGATTCAAAGAGAAAGTCCAAAGATGAATCTGCTAAAACAATACCCTTATACAAACTTTTCTCATTTGCGGATTCTTTTGATCATTTATTGATGTTTGTGGGGACTGTGGGTGCTATCGCCAATGGAATCTCCCCTCCCTTGATGACTTTGTTATTTGGAAATATGATCAATGCATTTGCAGGAACCAAAAACTCCAACGAAGTTGTTGAAGTTTCCAAGGTAATTCCTCATGAATCCCTTTTGTTAATATTATTAATCCATATTGGTGAAATTGGTGAAGTGGTTAAGGAGTTACTAGGAATATCAGAAGTTGTAACTTAA 366 0.3579 MSENIDLNGDSERKQDSKRKSKDESAKTIPLYKLFSFADSFDHLLMFVGTVGAIANGISPPLMTLLFGNMINAFAGTKNSNEVVEVSKVIPHESLLLILLIHIGEIGEVVKELLGISEVVT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02373 121 Gene3D ABC transporter type 1, transmembrane domain 25 106 IPR036640 GO:0005524|GO:0016020
Vimu8g02373 121 PANTHER ABC TRANSPORTER B FAMILY 9 86 IPR039421 -
Vimu8g02373 121 MobiDBLite consensus disorder prediction 1 25 - -
Vimu8g02373 121 SUPERFAMILY ABC transporter transmembrane region 34 84 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02373 Vimu-Chr8 30882612 30882977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02373 22 82 Calmodulin-binding Proteins AT2G36910 36.066 6.29e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02373 K05658 - gmx:102660078 140.969