Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02309 ATGACAACAGAAGTGGGAGATAAAGAGTTTTACGTTACATCATGCACGTACTTGCCCCCTCGGGTGAATTCAGATATACCATGGTGCACCACAAATGGCATGCTTCCAACTAATGCTTTACCAATGTTGGAGATGCAGATATGTATCATCTTTCTTGCAACCTTTCTCTTGCACGCCATTCTGGGTCGTCTAAGATTCCCCAGATTCGCTTCCATGAGCATTGTTGGCCTGATATTTGCAACCAGCTTCACTGAAGAATGGGCTCGGAAGAGTAGAGAGTTGTTCTTTTTTGACTCTCAGGCAAGTCTGGGGATGCTTTCAGTTTTTGGCTACATGCTTTTCCTGTTCTACACAGGGGTGAAAACAGACGTGAGTGTGATTCCCAGGACCAAAAGTAGTGCAGCCACCATAGGGTGTGCTACCATACTGGCTCCATTTATATGCAGCATGACTGTTGTGAATTTACACTCCACAAAATACCTGGACAGTGATCAGGTAGCAAAACTTAGACTTATCATTGGTGTGTTCTCGGTGACTCCTTTCCCTAACATTTGCACAGTTTTAAGTGATCTCAAGATTCTGAATTCGGAGCTAGGTAGATTAAGCCAGTCCGCAGCTTTGGTTACTGAGCTCTTCAATGTGGTCTTCACATCATTCCTTAGTATCTCCAAAATTTTGTCTAGTGATCCAGAAAAAGCCTGGTTTCGCTTCATAGTTTTCATTTTGTTTCTGCTAATGCTTATCTTCGTCTATCGCCCAGCCATGTTTTGGATCATAAAACAGACCCCAGAGGGTTCTCCTGTTAGTGATCACTATGTGTATTTCATACTCATAATGGCTTTTATGGCTTCCTATATCACACATCGCATTGGATTTTTGGCTCTCTTTGGCCCTTTTGTATTGGGCATGGCTACCCCAGAAGGGCCTCCATTAGGCACTGCAGTTATCAAAAAGATTGACACTTTTGTTAACTGGATGTTCATGCCTCTCTTTGTGACCACATGTGTGATGAGGGTGAACCTCAGAGACTTCATGAAATGGAGAGACGAAGTGAGTGGAGGAATTGACCAGTTCATGTTGCAAGCCCTGATTATCATTGCAGTAACTAGCACTGTCAAATTTGTTGTATGCATGCTGTTTCCTTTGTACCACAACGTGCCCTTGAGTGACTCAGTTTCTCTCTCTTTGGCCATGAATTGCAAGGGCGTAGTTGAATTGGCTGGATTCTCTATAATCAGAGATCTCATGGGCATGCCAGAAAACGTGTTGGCATTGGTGATAATGTGCATAATTCTGAGTGCTACAGTGGGGCCATTTCTTCTAGCATACCTCTACGACCCCATGAAGAAATATGCAGGAAACTACACCAAGCGAAACATCTTTGACCTCAAAAACAACTCCGAGCTTCGAGTTCTCACATGCATCCACAGACCCGACAACATTCCTCCGACCATCAACCTTCTCGAAGCAACCTTCCCCACCAAAGACAACCCTCTCTGTATCTACGCCCTCCAGCTCATAGAACTCATCGGAAGAGCTGCTCCTGTCTTCATTTCTCACCAACTCCAATCCAAGAAAACACACGACTCAAACGCTTCCATGGCAGAGAAACTCATCGATGCGTTCCAAAACTTCGAGCACGAGTTCAAGGAAGCACTGGTCGTGAACACCTTCACATCAATCTCACCAACTGAGTTGATGTACGATGACATCTGCACTTTGGCGTTGAACAAGTTCACCTCCCTCATTGTTCTTCCCTTTCATAAAAAGTGGTCTTCGGATGGCAACAGCATTGAGATAGAAGATGAGTCTCTGAGAGAGTTGAACTTCCGTGTCATGCGGAGAGCTCCATGTTCTGTTGGGATATTGATTGAGAGAATGCAAATGACGCATATTTTCTCCCCAGAAACGCCTTACACTGTTTGCATGCTTTTCATTGGAGGGAAAGATGATAGAGAAGCACTTTACTTTGCTAAGAGGATGACCAAGAATCCGCATGTCAGACTCACTGTGGTCAGGTTTTTGGCTAGGAATAATTATTCGGAGGTAACGGATTTGCAGGAACTGCTTGACACTGAGATTCTGAATGATATCAGGATTAACGGGAAGGTGGGTGAGACTAATGTGAGTTACATAGAGAAGATTGTGAAGGATGGACCTGAGACGGCTTTGGTGATTCGGAAGTTGGTGAAGGAGTATGATTTGATCATTGTTGGAAGACATGCTGGGATTGAAACTCCTCAAACTTCTGGGTTGTTGCAATGGAGTGAGTATCCAGAACTTGGGGTGCTTGGAGATTTGTTGGCTTCAACTGATGCTGCTGGCAAGGCTACTGTGTTTGTGATGCAGCAACAAAGAAGAGACACGGATGCTTAA 2376 0.444 MTTEVGDKEFYVTSCTYLPPRVNSDIPWCTTNGMLPTNALPMLEMQICIIFLATFLLHAILGRLRFPRFASMSIVGLIFATSFTEEWARKSRELFFFDSQASLGMLSVFGYMLFLFYTGVKTDVSVIPRTKSSAATIGCATILAPFICSMTVVNLHSTKYLDSDQVAKLRLIIGVFSVTPFPNICTVLSDLKILNSELGRLSQSAALVTELFNVVFTSFLSISKILSSDPEKAWFRFIVFILFLLMLIFVYRPAMFWIIKQTPEGSPVSDHYVYFILIMAFMASYITHRIGFLALFGPFVLGMATPEGPPLGTAVIKKIDTFVNWMFMPLFVTTCVMRVNLRDFMKWRDEVSGGIDQFMLQALIIIAVTSTVKFVVCMLFPLYHNVPLSDSVSLSLAMNCKGVVELAGFSIIRDLMGMPENVLALVIMCIILSATVGPFLLAYLYDPMKKYAGNYTKRNIFDLKNNSELRVLTCIHRPDNIPPTINLLEATFPTKDNPLCIYALQLIELIGRAAPVFISHQLQSKKTHDSNASMAEKLIDAFQNFEHEFKEALVVNTFTSISPTELMYDDICTLALNKFTSLIVLPFHKKWSSDGNSIEIEDESLRELNFRVMRRAPCSVGILIERMQMTHIFSPETPYTVCMLFIGGKDDREALYFAKRMTKNPHVRLTVVRFLARNNYSEVTDLQELLDTEILNDIRINGKVGETNVSYIEKIVKDGPETALVIRKLVKEYDLIIVGRHAGIETPQTSGLLQWSEYPELGVLGDLLASTDAAGKATVFVMQQQRRDTDA 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02309 791 Gene3D - 42 453 IPR038770 -
Vimu8g02309 791 Pfam Sodium/hydrogen exchanger family 48 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu8g02309 791 CDD USP_Like 647 741 - -
Vimu8g02309 791 PANTHER CATION/H + ANTIPORTER 38 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02309 Vimu-Chr8 30052572 30055370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02309 39 786 Antiporter Super Family AT5G22900 35.615 8.37e-161 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02309 K26731 - gmx:100785558 1185.63