LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu8g02309	ATGACAACAGAAGTGGGAGATAAAGAGTTTTACGTTACATCATGCACGTACTTGCCCCCTCGGGTGAATTCAGATATACCATGGTGCACCACAAATGGCATGCTTCCAACTAATGCTTTACCAATGTTGGAGATGCAGATATGTATCATCTTTCTTGCAACCTTTCTCTTGCACGCCATTCTGGGTCGTCTAAGATTCCCCAGATTCGCTTCCATGAGCATTGTTGGCCTGATATTTGCAACCAGCTTCACTGAAGAATGGGCTCGGAAGAGTAGAGAGTTGTTCTTTTTTGACTCTCAGGCAAGTCTGGGGATGCTTTCAGTTTTTGGCTACATGCTTTTCCTGTTCTACACAGGGGTGAAAACAGACGTGAGTGTGATTCCCAGGACCAAAAGTAGTGCAGCCACCATAGGGTGTGCTACCATACTGGCTCCATTTATATGCAGCATGACTGTTGTGAATTTACACTCCACAAAATACCTGGACAGTGATCAGGTAGCAAAACTTAGACTTATCATTGGTGTGTTCTCGGTGACTCCTTTCCCTAACATTTGCACAGTTTTAAGTGATCTCAAGATTCTGAATTCGGAGCTAGGTAGATTAAGCCAGTCCGCAGCTTTGGTTACTGAGCTCTTCAATGTGGTCTTCACATCATTCCTTAGTATCTCCAAAATTTTGTCTAGTGATCCAGAAAAAGCCTGGTTTCGCTTCATAGTTTTCATTTTGTTTCTGCTAATGCTTATCTTCGTCTATCGCCCAGCCATGTTTTGGATCATAAAACAGACCCCAGAGGGTTCTCCTGTTAGTGATCACTATGTGTATTTCATACTCATAATGGCTTTTATGGCTTCCTATATCACACATCGCATTGGATTTTTGGCTCTCTTTGGCCCTTTTGTATTGGGCATGGCTACCCCAGAAGGGCCTCCATTAGGCACTGCAGTTATCAAAAAGATTGACACTTTTGTTAACTGGATGTTCATGCCTCTCTTTGTGACCACATGTGTGATGAGGGTGAACCTCAGAGACTTCATGAAATGGAGAGACGAAGTGAGTGGAGGAATTGACCAGTTCATGTTGCAAGCCCTGATTATCATTGCAGTAACTAGCACTGTCAAATTTGTTGTATGCATGCTGTTTCCTTTGTACCACAACGTGCCCTTGAGTGACTCAGTTTCTCTCTCTTTGGCCATGAATTGCAAGGGCGTAGTTGAATTGGCTGGATTCTCTATAATCAGAGATCTCATGGGCATGCCAGAAAACGTGTTGGCATTGGTGATAATGTGCATAATTCTGAGTGCTACAGTGGGGCCATTTCTTCTAGCATACCTCTACGACCCCATGAAGAAATATGCAGGAAACTACACCAAGCGAAACATCTTTGACCTCAAAAACAACTCCGAGCTTCGAGTTCTCACATGCATCCACAGACCCGACAACATTCCTCCGACCATCAACCTTCTCGAAGCAACCTTCCCCACCAAAGACAACCCTCTCTGTATCTACGCCCTCCAGCTCATAGAACTCATCGGAAGAGCTGCTCCTGTCTTCATTTCTCACCAACTCCAATCCAAGAAAACACACGACTCAAACGCTTCCATGGCAGAGAAACTCATCGATGCGTTCCAAAACTTCGAGCACGAGTTCAAGGAAGCACTGGTCGTGAACACCTTCACATCAATCTCACCAACTGAGTTGATGTACGATGACATCTGCACTTTGGCGTTGAACAAGTTCACCTCCCTCATTGTTCTTCCCTTTCATAAAAAGTGGTCTTCGGATGGCAACAGCATTGAGATAGAAGATGAGTCTCTGAGAGAGTTGAACTTCCGTGTCATGCGGAGAGCTCCATGTTCTGTTGGGATATTGATTGAGAGAATGCAAATGACGCATATTTTCTCCCCAGAAACGCCTTACACTGTTTGCATGCTTTTCATTGGAGGGAAAGATGATAGAGAAGCACTTTACTTTGCTAAGAGGATGACCAAGAATCCGCATGTCAGACTCACTGTGGTCAGGTTTTTGGCTAGGAATAATTATTCGGAGGTAACGGATTTGCAGGAACTGCTTGACACTGAGATTCTGAATGATATCAGGATTAACGGGAAGGTGGGTGAGACTAATGTGAGTTACATAGAGAAGATTGTGAAGGATGGACCTGAGACGGCTTTGGTGATTCGGAAGTTGGTGAAGGAGTATGATTTGATCATTGTTGGAAGACATGCTGGGATTGAAACTCCTCAAACTTCTGGGTTGTTGCAATGGAGTGAGTATCCAGAACTTGGGGTGCTTGGAGATTTGTTGGCTTCAACTGATGCTGCTGGCAAGGCTACTGTGTTTGTGATGCAGCAACAAAGAAGAGACACGGATGCTTAA	2376	0.444	MTTEVGDKEFYVTSCTYLPPRVNSDIPWCTTNGMLPTNALPMLEMQICIIFLATFLLHAILGRLRFPRFASMSIVGLIFATSFTEEWARKSRELFFFDSQASLGMLSVFGYMLFLFYTGVKTDVSVIPRTKSSAATIGCATILAPFICSMTVVNLHSTKYLDSDQVAKLRLIIGVFSVTPFPNICTVLSDLKILNSELGRLSQSAALVTELFNVVFTSFLSISKILSSDPEKAWFRFIVFILFLLMLIFVYRPAMFWIIKQTPEGSPVSDHYVYFILIMAFMASYITHRIGFLALFGPFVLGMATPEGPPLGTAVIKKIDTFVNWMFMPLFVTTCVMRVNLRDFMKWRDEVSGGIDQFMLQALIIIAVTSTVKFVVCMLFPLYHNVPLSDSVSLSLAMNCKGVVELAGFSIIRDLMGMPENVLALVIMCIILSATVGPFLLAYLYDPMKKYAGNYTKRNIFDLKNNSELRVLTCIHRPDNIPPTINLLEATFPTKDNPLCIYALQLIELIGRAAPVFISHQLQSKKTHDSNASMAEKLIDAFQNFEHEFKEALVVNTFTSISPTELMYDDICTLALNKFTSLIVLPFHKKWSSDGNSIEIEDESLRELNFRVMRRAPCSVGILIERMQMTHIFSPETPYTVCMLFIGGKDDREALYFAKRMTKNPHVRLTVVRFLARNNYSEVTDLQELLDTEILNDIRINGKVGETNVSYIEKIVKDGPETALVIRKLVKEYDLIIVGRHAGIETPQTSGLLQWSEYPELGVLGDLLASTDAAGKATVFVMQQQRRDTDA	791

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu8g02309	791	Gene3D	-	42	453	IPR038770	-
	Vimu8g02309	791	Pfam	Sodium/hydrogen exchanger family	48	441	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Vimu8g02309	791	CDD	USP_Like	647	741	-	-
	Vimu8g02309	791	PANTHER	CATION/H + ANTIPORTER	38	787	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu8g02309	Vimu-Chr8	30052572	30055370	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu8g02309	39	786	Antiporter Super Family	AT5G22900	35.615	8.37e-161	486

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu8g02309	K26731		-	gmx:100785558	1185.63

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