Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02192 ATGTTTCCATCATCCTCTTCTCTTTCTTCTTTTGACCACTCCACTGGTACTGATAGTGTTGCTGGTTCACCCTCTTTGCAGAAACCCTCATCTTCAACAACTCATCACCACCATTTATCAAGAAAGAAAAAACTTGGTAAACCCGTAGGTTCTAAGAACAAGCCAAAACCAGTACTTGTGATTGACAAAGCCAATAAGAGTGTTGTAAAACTTGTTTTCAATGAAGTTCCTGAAAGTTATGATGTGATTAGGACAATTGTCAAATTCGCTCTTCATCACCAAGTTAGCATCATAGTGTTGAACGCATCAGGAACTGTTTCCAATGTCACTATTCGTAACTCTCACTATCATGCTTCTCCTTTCACTCTTTATGGACCTTTCAAATTAATTTCCCTCACCGGTACCTACATACACCCTCGTTCTTCTTTTGGCTTTTCTGTTTCTGGAATCAAAGAACAATGCTTCATCGGAGGAGTTGGAGGAAAAGTTGTTATAGAGAATGGAGTTATGGTGGCAACTGTTATTGTGAACAAATTTTAA 540 0.3852 MFPSSSSLSSFDHSTGTDSVAGSPSLQKPSSSTTHHHHLSRKKKLGKPVGSKNKPKPVLVIDKANKSVVKLVFNEVPESYDVIRTIVKFALHHQVSIIVLNASGTVSNVTIRNSHYHASPFTLYGPFKLISLTGTYIHPRSSFGFSVSGIKEQCFIGGVGGKVVIENGVMVATVIVNKF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02192 179 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 171 - -
Vimu8g02192 179 MobiDBLite consensus disorder prediction 1 33 - -
Vimu8g02192 179 CDD DUF296 81 175 IPR005175 -
Vimu8g02192 179 Gene3D - 69 179 - -
Vimu8g02192 179 Pfam Plants and Prokaryotes Conserved (PCC) domain 74 174 IPR005175 -
Vimu8g02192 179 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 174 IPR014476 GO:0003680
Vimu8g02192 179 MobiDBLite consensus disorder prediction 34 50 - -
Vimu8g02192 179 ProSiteProfiles PPC domain profile profile. 66 179 IPR005175 -
Vimu8g02192 179 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02192 Vimu-Chr8 28402716 28403288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02192 37 137 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 33.654 2.72e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02192 - - vun:114188375 281.952