Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02160 ATGGCAGGTGAGGTGGTGAAGAAGGAAGAATCTCTAAACCTGAAAATCACCAACAAGAGTTATGTGCAACCTGAGGAGAAGATTGGGAGAAAAGAGTACCAGTTGGTGACTTTTGATCTTCCATACTTGGCTTTCTACTACAACCAGAAGCTACTGTTCTACAAAGGGGAAGACTTTGATGGCATGGTTCAGAAGCTGAAGCTTGGGCTTGGTGTGGTTCTCAAGGAGTTCCACCAACTAGCTGGAAAGTTAGGGAAAGATGAAGAGGGTGTGTTCAGGGTTGAATATGATGATGACATGCTTGGTGTTGAGGTTGTCGAAGCTGTTGCTGATGAGATTGCTGTGGATCAACTTACTGTTGCTGAAAGTTCCACCAATCTCAAGGACCTCATACCTTACACTGCTGTCTTGAACTTGGAAGGCATGCATAGACCCTTGCTCGCAGTTCAGTTAACGAAGCTGAAAGATGGGCTTGCGATGGGCCTGGCATTCAACCACGCTGTATTGGATGGGACTGCCACGTGGCAATTCATGACATCGTGGGCCGAGATTTGCAGTGGGTCACCTTCCACGTCAGCACCACCGTTCCTGGACCGGACCAAGGCCCGGAACACGAGAGTGAAGCTGGACCTCTCCCTGCCCGAGCCCAACGGCCAACCAACTTCCAACGGTGATGCAAAGCCCACTCTTAGGGAAAGGATATTCAAATTCTCGGAGTCAAAGATCGACAAGATCAAGTCAACGGTCAACGAGAACCCTCCATCGGACGGCTCAAAACCGTTCTCAACATTTCAAGCTCTTTCCTCCCATGTCTGGCGCCATGTAAGCCATGCACGTAACCTGAAGCCGGAGGACTACACCGTGTTCACCGTATTCGCCGACTGCCGGAAGCGGGTGGACCCACCGATGCCGGAGAATTACTTCGGAAACCTAATTCAGGCTATATTCACCGTTACGGCGGCTGGGCTTTTAGCGGCTCATCCGCCGCAATTCGGTGCTTCATTGGTTCAAAAGGCCATTGAAGAGCATAATGCGAAGGCTATCGATGCACGTAACAAGGAGTGGGAGAGTGCACCGAAAATTTTCCAATTCAAAGATGCTGGGGTGAATTGTGTGGCTGTTGGAAGCTCACCTAGGTTTAAGGTTTATGACATTGATTTTGGTTGGGGTAAGGCAGAGAATGTGAGAAGTGGAACTAATAACAAGTTTGATGGGATGATTTACTTGTATCCAGGGAAGAATGGAGGAAGGAGCATTGATGTGGAATTAACCTTGGAGCCTGAGGCTATGGCGAGGTTGGAGAAAGATAAGGATTTTCTTTTGGAAGCATGA 1332 0.488 MAGEVVKKEESLNLKITNKSYVQPEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFDGMVQKLKLGLGVVLKEFHQLAGKLGKDEEGVFRVEYDDDMLGVEVVEAVADEIAVDQLTVAESSTNLKDLIPYTAVLNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAEICSGSPSTSAPPFLDRTKARNTRVKLDLSLPEPNGQPTSNGDAKPTLRERIFKFSESKIDKIKSTVNENPPSDGSKPFSTFQALSSHVWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPENYFGNLIQAIFTVTAAGLLAAHPPQFGASLVQKAIEEHNAKAIDARNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKAENVRSGTNNKFDGMIYLYPGKNGGRSIDVELTLEPEAMARLEKDKDFLLEA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02160 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 440 - -
Vimu8g02160 443 Pfam Transferase family 14 439 - -
Vimu8g02160 443 FunFam Tryptamine hydroxycinnamoyl transferase 217 437 - -
Vimu8g02160 443 Gene3D - 11 212 IPR023213 -
Vimu8g02160 443 Gene3D - 214 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02160 Vimu-Chr8 27989759 27992776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02160 64 442 Monolignol Biosynthesis Gene Families AT5G48930 27.919 1.71e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02160 K19747 - gmx:100790669 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02160 8 27989759 27992776 Vimu8g02160 8 27989759 27992776 ECH