Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02148 ATGAGGCCGATTTTAATGAAGGGCCACGAGAGGCCACTCACATTCCTCAAGTACAACAGGGAAGGTGATATCCTCTTCTCCTACGCCAAGGACCACAACCCTACAGTCTGGTTCACCGACAACAATGAACGCCTCGACACTTATCGCGGCCACAACGACATCGTTTGGTGCTTCGACGTCTCAAGCTTTTCAATTCAACTTTATCTTTCTATTCAGCTTTTCAAAACTGTTCCTCACACTGATTGTATATGGTGCAGGAGATTCTGGTCAACTCATAATGGGGAGTGCGGATCATACCGCGAAGCTATGGAACATGCAGTCTGGAAGACGTTGACACCATTGAGGAAACAACAGAGGAGACAATTTTGTCAAGACAAACTTCTGTCAACCTTGTTCCTTTTATTGGTCAAAGATTTGTATCTCAAGAAGCAGCTTATGGATTTTATTGTAGCTTTGCTAAGCAGTGTGGCTTTTCAATTAGACGACATCGAACTCGAGGGAAAGATGGGGTTGGAAGGGGAGTTACAAGGAGGGATTTCACTTGCCATCGTGGTGGTTATCCCCAGATTAAACCTTCTCATGACGGAAAGGTGCAAAGGAACCACAAAATCTTCTCGTTGTGGTTGCCAAGCATACATGCGTATTGTGAAAAGGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTAGTCTTTTGATGAGTTTTTTGAGAGAGGAAGGAAGGTGGTCATCGGTGTTACTGCCACGACGGAGTCATAACCGGAGGCAAGTTCCTCTAGCCACTGCAACAAATATCCAACCCCGGTGA 807 0.456 MRPILMKGHERPLTFLKYNREGDILFSYAKDHNPTVWFTDNNERLDTYRGHNDIVWCFDVSSFSIQLYLSIQLFKTVPHTDCIWCRRFWSTHNGECGSYREAMEHAVWKTLTPLRKQQRRQFCQDKLLSTLFLLLVKDLYLKKQLMDFIVALLSSVAFQLDDIELEGKMGLEGELQGGISLAIVVVIPRLNLLMTERCKGTTKSSRCGCQAYMRIVKRADFDVPEWRVTSLLMSFLREEGRWSSVLLPRRSHNRRQVPLATATNIQPR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02148 268 SUPERFAMILY WD40 repeat-like 4 102 IPR036322 GO:0005515
Vimu8g02148 268 ProSiteProfiles Trp-Asp (WD) repeats profile. 6 47 IPR001680 GO:0005515
Vimu8g02148 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 67 - -
Vimu8g02148 268 Gene3D - 1 101 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02148 Vimu-Chr8 27832292 27833570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02148 1 67 Eukaryotic Initiation Factors Gene Family AT2G46280 77.612 7.83e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02148 K03246 - pop:7471451 122.864