Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02147 ATGGCAGGACGTTCAGGAACACAACTCTCACTGGCTCAAATTCTTTTGCTGGGTGAAGTGGCAAAAGCAGATGCTTCAGTTCATGATGAATCACAAGGGATATTAGTTGCGATAATAAATACAGACAAGCAAAAAAAGTTAGATGAAAATTATATAAGCACATTCAGACTTACAAGAGTTAACAATAATGATACAATATCCTACTCAAAGATTGATGTTCATAGTGATGAAGATATTCCTACAGTCCTCAAAGAGATAGAAAAAATTGGTTGTGATATTTACATAGTTGGACAAAGGAATTGTAGGAACTCTAAGGTCTTATCAAATTTGTTGAAGTGGTGTGAGTGCTTAGAACTTGGAGTTATTGGGGATATTTTGGTGTCAAACAATTTTGGTTCACGCTCGTCTATGTGGGAAGCTTGTATCCAAAGCACTAAGAAGAGGGCTAACAAACCCAAGTGCCCCATCATTGGCAAAAGGATTCAG 486 0.3724 MAGRSGTQLSLAQILLLGEVAKADASVHDESQGILVAIINTDKQKKLDENYISTFRLTRVNNNDTISYSKIDVHSDEDIPTVLKEIEKIGCDIYIVGQRNCRNSKVLSNLLKWCECLELGVIGDILVSNNFGSRSSMWEACIQSTKKRANKPKCPIIGKRIQ 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02147 162 PANTHER CATION/H + ANTIPORTER 26 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02147 Vimu-Chr8 27824125 27826109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02147 1 137 Antiporter Super Family AT2G13620 25.547 5.66e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02147 - - var:108320251 222.246