Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02119 TCTACTGCTTTAGCTTCAATGGTTTCAAAGCAACACGATCGCGTGGCTGGTAAGGTTCGGGTCATCGCCAGGATCCGTGGGTTTTCGGATCCTGAGGCTAATTCGGAGACTGGTACTGCAAGGACTGTGGAGTGGATTTCGGTGAATGGTGAAAATTTGGATGATGTCTCCATCTCCTTCAGAGACCATCCCAGTCGTTATTTGGTGGACTATTGCTATAAGGAAGATGAAGACAGTGAAATGATATATTCAAGGGAGGTAAAGCCTTTTGTGTCTGCAGCTTTTGAAGGTCATAACAGCACTGTTATTGCACATGGAGCTAGGGGTAGTGGAAAGACCCACATAATTCAGGGCTCTGCTGAGAGGCCGGGTTTGGCAGTGCTTGCTATTGCTGAGTTTCTTCCAATTGCTGAGAAAAACGGGAAATCCATAAGTGTTTCTTTCTATGAGGTTGATCATCAGGAACGGGCCATGGATTTATTAAATCCAGAGAAGCCGCCTATCTTGGTTTTTGAAGATCGTGGTAGAAATCAGTTTAAAGGATTGAGTAAGGTTCCTGTGAAATCAGTTAGTGAATTTCAGAATTTGTACTCCACTGCGTGTTTGAGCTTGAAGGGAGCTCCCAAAAAAGGTGGTCAAAGAAGTCATATGGGATTGATTGTGAATGTCGTTTCCCAGAATGAAAGTGTAGGAAGTATTGTCAGCAAAATGAATTTTGTTGACTTAGCAGGGTATGAAGATACCAGAAAGAAAAGTAGTGATGGCTCCTGCCTAACTGAGATTAACAAAATTAACAAATCAATATATGCATTATTGAATATTTGCCATGCTTTGAGTACAAGTGAAAGTCATATTCCCTACCGGGAAAGCAAGCTTACGCGCATACTGCAGGATTCTTTGAAGGGAACTAGCAGAATTTTACTGGTTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTAAGCTTGGCTTCACGGTCATGTCATCGGATTCATCATCAGACATTCTTAGATTCTACCAAGAAAAGTGTAAGTTCAGCAAATATGAGACAGATACCTAAAAGTGTTTCTTGGACAGCAAAGAAATTTCATCATGGTTCTTCTAAACTAACGAAAGGAAGGAAATTGTTTGATGAAGCTAGTCATTCCACACCTAAGGTTGAGAAGGAAATGGTTACTAAAGCATCAAAGCCTGTGATGGATAACTCATTACCTGAGACTGGAAATCATGACAACTCTGGAGTGGAAACGATAGTGAATAATTTAGCATTGACAAATGTTTCATTTCCGAAGGATGACTTATTTGCAAAAGCTAGTCAGGACATGAAACTTTATCCCCCTTTGGAAAATGGTGATTCGTCCTTGAACGCTAGCAGTGAAGTGGAAATCAATTCCCTAGCAGCTAAGAATGTTTTAGTGGATGGAGATGAAGGTAAAAAGGAGAATACCCCTTGTATCAATCATTCCTGTGAATCATTGTCAATAATAGTTCACGAAGGTCATAATTCACCACCCATTAGTTCACAGTTGCGCGATCTTTCCAATAGTCTTAAAATGCTATGCTCTTCAACTTCATCATGCTTGCAAAATTCAGAAAAACAACCCATTCCAGTTGTAGAACCAAAAACTCCTATAATTCAACAGAACATGAGCCAATGGGATGAAATGAATGGCAAAAGTCCTTGGGAGACATTCAGCATGCGAGGCTCTGGGATGAAGAGTTCCATCGTTCAAGAATATCTTAGATTTTTGAACACGGCTGACAAGGAAGAATTAAAAAGATTAAAGGGAATTGGAGACAAAAGGGCTAACTTTATACTTGAACTTCGAGAAGAATCTCCAGAACCTTTCAAAAGTCTAAACGATTTAAAGGACATTGGGCTCTCTGCAAAGCAGATTAAGGGAATGATGAAAAAAGAAGTTGGAGAGCTTTTCAGTGAATTATAA 1956 0.4003 STALASMVSKQHDRVAGKVRVIARIRGFSDPEANSETGTARTVEWISVNGENLDDVSISFRDHPSRYLVDYCYKEDEDSEMIYSREVKPFVSAAFEGHNSTVIAHGARGSGKTHIIQGSAERPGLAVLAIAEFLPIAEKNGKSISVSFYEVDHQERAMDLLNPEKPPILVFEDRGRNQFKGLSKVPVKSVSEFQNLYSTACLSLKGAPKKGGQRSHMGLIVNVVSQNESVGSIVSKMNFVDLAGYEDTRKKSSDGSCLTEINKINKSIYALLNICHALSTSESHIPYRESKLTRILQDSLKGTSRILLVSCLNPSFCQDTIYMVSLASRSCHRIHHQTFLDSTKKSVSSANMRQIPKSVSWTAKKFHHGSSKLTKGRKLFDEASHSTPKVEKEMVTKASKPVMDNSLPETGNHDNSGVETIVNNLALTNVSFPKDDLFAKASQDMKLYPPLENGDSSLNASSEVEINSLAAKNVLVDGDEGKKENTPCINHSCESLSIIVHEGHNSPPISSQLRDLSNSLKMLCSSTSSCLQNSEKQPIPVVEPKTPIIQQNMSQWDEMNGKSPWETFSMRGSGMKSSIVQEYLRFLNTADKEELKRLKGIGDKRANFILELREESPEPFKSLNDLKDIGLSAKQIKGMMKKEVGELFSEL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02119 651 Gene3D Kinesin motor domain 3 332 IPR036961 -
Vimu8g02119 651 PRINTS Kinesin heavy chain signature 285 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g02119 651 PRINTS Kinesin heavy chain signature 236 254 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g02119 651 PRINTS Kinesin heavy chain signature 97 118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g02119 651 Gene3D - 575 647 - -
Vimu8g02119 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 329 IPR027417 -
Vimu8g02119 651 PANTHER KINESIN-RELATED 21 389 IPR027640 GO:0003777|GO:0007018
Vimu8g02119 651 SMART kinesin_4 16 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g02119 651 MobiDBLite consensus disorder prediction 383 416 - -
Vimu8g02119 651 Pfam Kinesin motor domain 24 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu8g02119 651 Pfam Helix-hairpin-helix motif 587 634 - -
Vimu8g02119 651 MobiDBLite consensus disorder prediction 383 398 - -
Vimu8g02119 651 FunFam Kinesin-like protein KIN-10C 573 647 - -
Vimu8g02119 651 SUPERFAMILY RuvA domain 2-like 580 642 IPR010994 -
Vimu8g02119 651 ProSiteProfiles Kinesin motor domain profile. 18 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02119 Vimu-Chr8 27517445 27522490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02119 15 361 Calmodulin-binding Proteins AT5G65930 28.571 9.07e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02119 K10403 - gmx:100809612 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02119 8 27517445 27522490 Vimu8g02119 8 27517445 27522490 ECH