Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02029 ATGTCCAACGAAACCATTGACCCCCGCCTCCAAATCCGCCCCAACTCCGACGGCACCTTCACCGTGTCCAACGAAACCATTGATCCCTACCACCGTCTCCAAATCCAGCCCAACCCCGACGGCACCTTCACTCGCCTCAACGGCGTCGCCATTCCACACACCGCACCCTCTTCAGACCCCTCTCTTCCAATTCCAGTTCTCACCAAAGACATCACCATCAACCCACACAACCAAACATGGCTGCGCTTATTCCTACCACGAACATTACTCTCCTCTTCCAACCCCAACAAGCTTCCTCTCATCCTTTTCTTTCACGGAAGCGGATTCGTGCTGCTCAGTGCAGCTTCCTCCGTGTTTCATGATTTCTGCGTCCAAATCGCCGATTCCGCTCAGGCCATTGTTGCATCTGTCGACTACCGTCTCGCGCCGGAGCACCGACTTCCGGCGGCCTACGACGATGGCGCCGAAGCGCTGCGGTGGATCGGAAACTGCGAAGATGAGTGGTTGCGTCAATACGCTGATTATTCGAAGTGTTATCTTATGGGGAATAGCGCTGGGGCAACTATCGCTTACCACACAGGTCTACGTGCAGTTGAAGAGGTGAATGATCTGGATCGAGTGAAGATCCAAGGGTTGATATTGCGTCAACCATTCTTCGGTGGAGTGCAGAGGACAGAATCGGAGTTAAGGCTTGATAATAACCCACTCATTCCTCTGTGTGTTACGGATTCGATGTGGGAGTTGGCACTGCCAATTGGTGCTGATCGTGACCATGAATATTGCAGTGTAAGGGCTGGAAATGGGGTTGAGAAATTTGAGAAGATGAAGGAGCTTGGTTGGAGGGTGCTGGTGAGTGGCAACAATGGTGACCCATTGGTGGATCGTGATAAGGAGTTGGTGCAATTGATGGAAGAAAAAGGAGTGAAAGTGGTGAAGGATTTTCAAGAAGAAGGCTGCCATGGAGTTGAACTCTTTGACCCATTGAAAGCAAACCACTTCATTGATTTGGTTAAACACTTCATTAATCCAATCTGTGTTTAG 1041 0.5062 MSNETIDPRLQIRPNSDGTFTVSNETIDPYHRLQIQPNPDGTFTRLNGVAIPHTAPSSDPSLPIPVLTKDITINPHNQTWLRLFLPRTLLSSSNPNKLPLILFFHGSGFVLLSAASSVFHDFCVQIADSAQAIVASVDYRLAPEHRLPAAYDDGAEALRWIGNCEDEWLRQYADYSKCYLMGNSAGATIAYHTGLRAVEEVNDLDRVKIQGLILRQPFFGGVQRTESELRLDNNPLIPLCVTDSMWELALPIGADRDHEYCSVRAGNGVEKFEKMKELGWRVLVSGNNGDPLVDRDKELVQLMEEKGVKVVKDFQEEGCHGVELFDPLKANHFIDLVKHFINPICV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02029 346 Pfam alpha/beta hydrolase fold 101 322 IPR013094 GO:0016787
Vimu8g02029 346 Gene3D alpha/beta hydrolase 30 344 IPR029058 -
Vimu8g02029 346 SUPERFAMILY alpha/beta-Hydrolases 55 342 IPR029058 -
Vimu8g02029 346 PANTHER ARYLACETAMIDE DEACETYLASE 40 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02029 Vimu-Chr8 26300370 26303016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02029 51 326 Carbohydrate Esterase AT5G16080 34.386 1.23e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02029 - - vra:106767967 679.863