Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02012 ATGGAGAACTGTGCAGAGAATATTACCATGAATGGTGAAAGCAATGACGAATTTATTAACGTAGTTGATAGTGTGTCTGACTTGGTTCCTACGGTCAACATGTGTTTCGACAGTATGGAAGATGCAAAGAAATATTATTCAGATTACGGAAAAAGAATTGGATTTGGTGTTCGTACAAGAACTTCAAAAAAGGACAACAATAACGAATTGTATTATTTGAGATTGGTATGTTCAAGGGAAGGTAGATATGTCTCTAACATTCGTCCTGAAGTAAAAACCCTTCCTAGTCAAACAAAGCAATGCCCTGCGGGGATAACATTTGCCAAAAAAGATGACAAATGGGTTGTGAGGACTGTTATGGTAGATCACAGTCATGATCTTTGTCCACAAACTTCCAATCTCATTCGTGCCAACAGAAAATTGGAC 426 0.3779 MENCAENITMNGESNDEFINVVDSVSDLVPTVNMCFDSMEDAKKYYSDYGKRIGFGVRTRTSKKDNNNELYYLRLVCSREGRYVSNIRPEVKTLPSQTKQCPAGITFAKKDDKWVVRTVMVDHSHDLCPQTSNLIRANRKLD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02012 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 140 - -
Vimu8g02012 142 Pfam FAR1 DNA-binding domain 44 128 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02012 Vimu-Chr8 26088175 26089045 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vimu8g02012 FAR1 1.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02012 - - vra:106766675 228.794