Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02007 ATGTCAACTTCTCTGCATGAAAACTCTTATTCAATCTGGTTTTTCCTTCCAATCGCTACCTTGATCATCTTCTTTTTGCGTACTGTCATCAAATGCAATCATAATATCAATTCTGCAATAGCCAGAAAAACCTCACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCACCAACTTGGCACTCTCACTCACCGAACTCTTCATTCATTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAAGGTGCCAGTTCTTGTGGTCTCAAAGGCCGAGGCAGCTCGTGAGGTTATGAAAACCCATGACCTTGTTTTCTCAAATAGACCACATCGTAAGCTGTTTGATATCTTCTTGTACGATTCCAAAGATGTCGCATCTGCTCCATATGGCAACTACTGGAGGCAGATAAGGAGTATTTCTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCCTTTGGTGCAGTGAGAGAAGAGGAAATCTCCATAATGATGGATAAGATTAAGCAGTGTTGTTGTTCTGTGACGCCTGTGAATTTAACTGATTTATTTTCTACGGTCACAAATGACATAGTGTGCAGAGCTGCTCTCGGAAGGAGATACAGTGCAGGAGAAGGGAGTAAGTTTTGGGAGCCAATGAATGAGATGATGAAGATGTTAGGTGCTCCAGTTATAGGGGATTATATACCTTGGCTTGGTTGGGTTGGAAGAGTTAATGGATTGTATGGTAGGGCAAAGAGATTGGCTAAACAGCTTGATGAATTTTTTGATGAAGTTGTTGATGAGCATGTAAGTAGAAGAGGGCATGATGTGCACGGTGATGATGATGACGACGATGAACATAATGATTTGGTGGACATTTTGCTGAGAATCCAAAAGACAAACGCCTTGGGTTTCCAGATTGACAAAACAGTCATAAAGGCTATAATCCTGGATATGTTTGTAGCAGGCACTGAAACTAGCTCCACAATCCTAGGATGGATAATGACAGAACTCTTGAGGCACCCAAGTGTGATGCAGAAGCTAAAAGATGAGATAAGGAATGTGGTTAGTGGTAGAACTCGCATAACTGAGGAAGATTTAAGCAACATGCCTTATTTGAAAGCAGTGATTAAAGAAAGTTTTCGATTACATCCCCCAGCTCCCTTGTTGCTTCCAAGGGAATCCATGGAAGATACCAAAGTGATGGACTATGACATTGCAGCAGGCACACAAGTAATAGTTAATGCTTGGGCAATAGCAAGAGATCCTTGTTACTGGGAAAAACCTGAAGAGTTTGAAGCAGAAAGATTCTTAAAGAGTTCAAGAGATGTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCTGGAAGAAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAATTGGTCATAGCAAACCTTGTTCATCACTTTGATTGGGAAGTGCCAAGTGGAGTAATGGGGGATCAGACACTCGACATGACTGAATCTGCAGGGTTGACCAGTGGTAGAAAATTTCCTCTCATAGCATTTGCCTCTTACCATGCATAA 1557 0.4143 MSTSLHENSYSIWFFLPIATLIIFFLRTVIKCNHNINSAIARKTSPPSPPKLPIIGNLHQLGTLTHRTLHSFAQTYGPLMLLHFGKVPVLVVSKAEAAREVMKTHDLVFSNRPHRKLFDIFLYDSKDVASAPYGNYWRQIRSISVLHLLSAKKVQSFGAVREEEISIMMDKIKQCCCSVTPVNLTDLFSTVTNDIVCRAALGRRYSAGEGSKFWEPMNEMMKMLGAPVIGDYIPWLGWVGRVNGLYGRAKRLAKQLDEFFDEVVDEHVSRRGHDVHGDDDDDDEHNDLVDILLRIQKTNALGFQIDKTVIKAIILDMFVAGTETSSTILGWIMTELLRHPSVMQKLKDEIRNVVSGRTRITEEDLSNMPYLKAVIKESFRLHPPAPLLLPRESMEDTKVMDYDIAAGTQVIVNAWAIARDPCYWEKPEEFEAERFLKSSRDVKGHDFEVIPFGAGRRGCPGIMFAMNVIELVIANLVHHFDWEVPSGVMGDQTLDMTESAGLTSGRKFPLIAFASYHA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02007 518 PANTHER CYTOCHROME P450 71B11-RELATED 30 514 - -
Vimu8g02007 518 Gene3D Cytochrome P450 33 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 SUPERFAMILY Cytochrome P450 46 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 CDD CYP71-like 75 510 - -
Vimu8g02007 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vimu8g02007 518 FunFam Cytochrome P450 83B1 33 513 - -
Vimu8g02007 518 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 Pfam Cytochrome P450 46 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02007 518 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02007 Vimu-Chr8 26046130 26048083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02007 42 515 Cytochrome P450 AT3G48270 50.737 3.18e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02007 - - vum:124838435 771.541