Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02006 ATGGTGGGCGCGGTTGTGCGATTGGAGTTCTCGGTGGCTTCCGGAGATGCGGTGGCTGCTCACGGTGGTGGTCCGGTGAGAGGTTGGCGTTTCAGCGACGGTGACGCATGGAAGCTAGTGCAAAAGAGAGAAGGAGAGGGGAAGGAGAGGTCGTGGCCGGCCGTGATCCTGGTGGCGTCTGCCGTCGTCGGCGATGATGACGAGACTGGAGAACGTGGTCGCACGTCGTTAATGGCGACGCCATTGATGACGGTTCGTGACGGAGAGAGGGAGAGAGACCCTAGGTCTCTGATGAGAGGGAGTGTGCGTGATGGGAATGAGGGGAGTAATTTGAACCCTAAGGAAGTTTTGGGAAAACCATTTGGTGATCATTTGAAGCAGAAGCCAATGACGACTGTTCTGAATGGAACCATTTCCTTGTGGTTCTTCATTCCCATGCTAGCATTCTTCATCTCACTAGCCTTTTACACCATATTCAATTTTCTACCTAAACTCAACTCCAAATCAGGAAAAAACTTACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAACCTACACCAACTTGGCAACCACATTCACCACACTCTCCAATCCTTTTCTCAAACCTATGGCCCTTTGATGTTGCTTCACTTTGGGAAGGTGCCAGTTCTTGTGGTCTCAAATAATGAAGCAGCACGTGAGATTCTGAAAAACCAAGACCACGTTTTCTGTAACAGACCACATCGTAAGATGTCTGATATCATCCTATATGATTCCAAAGATGTGGCATCTGCTCCCTACGGCAAATACTGGAGACAGATAAGGAGTATTTGTGTCTTGCATATTCTCAGTGAAAAAAAGGTTCAATCCTTTGGTGCAGTGAGAGAAGAGGAAATCTCCATAATGATGAAAGAGATTAAACATTGTTGTTCTTCTTTGATTCCTGTGAATTTAACTGAATTGTTTTCTACAGTCACGAATGACATAGTGTGTAGAGCTGCTCTCGGAACGAGATACAGTGGAGAAGGACGGAGACAGCTTTGGGAGCTACTGAATGAAATGATGAAGTTGATGGGTGCTCCAATTATATGGGACTATATACCTTGGCTTGATTGGGTGGGAAGAGTTAATGGAATGTATGATAGGGCAAAGAGAGTGGCTAAAGAGCTTGATGAATTTTTCGATGAAGTTGTTGATGAGCATGTAAGTAGAAGAGGGCATGATGTGCATGGTGATGATGATGATGATGATGATGAAGAAGAAGAAGAAGAAGAGGAGAATGATCTGGTGGACATTTTGTTGAGGCTCCAAAAGAAAAACAGAATGGGGTTTCAGATTGATAGAACAATCATAAAGGCTTTGATCTTGTTCTGTCACGAAAGAACCAACCATTGTGAACATCTTATATACATAAACAGACCGACACATTACCAGCACATTATTACAAAATCCACGAGCGATCACAATCTTGAAGCAGAAGCCAATGACGAATTTTCTGAACGGAACCATCTCCCCGTGGTTCATCCTTCCCATGCTAGCTTTCTTCATCTCACTAGCCTTTCCCACCATATTCAATCTTCTATCCAAACTCAACTCAAAATCAGCAAAAAACTTACCACCATCTCCACCAAAGCTTCCAGTAATAGGAAATCTCCACCGACTTGGCAACCTCACTCACCACACTCTCCAATCCTTTGCCCAAACCTATGGCCCTTTGATGGTCCTCCACTTTGGGAAAGTGCCAGTTCTTGTGGTTTCAAACGCGGAAGCAGCACAGATGTGGCATCTGCTCCATATGGGCACTACTGGAGGCAGGTGAAGAGTATCTGTGTGTTGCATCTGCTGAGTGGGAAAAAAGTTCAGCGCTTTCGTAGAGTGAGGGAAGAGGAAGTTATGATAATGGTAGAGAAAGTTATGGAGAGTTGTAGTTCTCTGAAAGCAGTGAACTTAACTGATTTGTTCTCTGATGTGACGAATGATATAGTGTGTAGGAGTGTTATAGGAAGAAGATATGAAGGGAGTGTGCTTAGGGAGCCAATGAGCAAGTTGGAAGAGTTTTTGGGAGCTTTTGTTATAGGGGATTATATACATTGGCTTGATTGGGTTGGAAGAGTTAATGGAATGCATGGTAGGGCAAAGAGAGTGGCTAAGCAGCTTGATGAATTTTTGGATGAGGTTGTTGATGAGCATGTTCGTATGAGAAACCATGATGGTGATGTTGTTAATGGTGGTGATATGCAGAATGATTTTGTTGATATCTTGCTGGAGATTCAGAAAACAAGCTCCACAACAGATTTTCAGGTTGATAGGACTATCATGAAGGCTTTGATCATGGATATGTTTGGTGCAGGAACTGATACCACCCTTGCTGTGTTAGAATGGGCTATGACAGAGCTGTTGAGACATCCAAATGTGATGCAGAAACTGCAAGATGAGGTGAGAAGTGTGGGTAGGGCAAAGACTCATGTAACTGAGGAGGATTTGAATGAGATGCCATACTTGAAAGCAGTGATTAAAGAGATTCTGAGGTTGCATCCACCATCTCCTATACTGATTCCAAGGGAATCCATGCAAGACACCAAAGTGATGGGTTATGATATTGCAGTTGGGACACAGGTACTGATCAATGCTTGGGCAATTTCCACAGACCCTTCCTATTGGGATCAACCTCTTCAGTTTCAACCAGAGAGATTCTTGAAGAATTCAATAGATATCAAAGGGCATGATTTCCATTTGATTCCGTTTGGAGCAGGAAGAAGGGGTTGTCCAGGAATAGCTTTTGCCATGGTTGTCAATGAGTTGGTTCTTGCAAACACTGTGCACCAGTTTGATTGGACTGTGCCTGCTGGAGTGGTGGGGGACCAGACATTTTGCTTGTGTGAAACTACTGGATTGACTGTTCATAGAAAACTACCTCTTCTTGCACTTGCATCTCCTCATATGAACTGTTCCAAATAA 2940 0.4401 MVGAVVRLEFSVASGDAVAAHGGGPVRGWRFSDGDAWKLVQKREGEGKERSWPAVILVASAVVGDDDETGERGRTSLMATPLMTVRDGERERDPRSLMRGSVRDGNEGSNLNPKEVLGKPFGDHLKQKPMTTVLNGTISLWFFIPMLAFFISLAFYTIFNFLPKLNSKSGKNLPPSPPKLPIIGNLHQLGNHIHHTLQSFSQTYGPLMLLHFGKVPVLVVSNNEAAREILKNQDHVFCNRPHRKMSDIILYDSKDVASAPYGKYWRQIRSICVLHILSEKKVQSFGAVREEEISIMMKEIKHCCSSLIPVNLTELFSTVTNDIVCRAALGTRYSGEGRRQLWELLNEMMKLMGAPIIWDYIPWLDWVGRVNGMYDRAKRVAKELDEFFDEVVDEHVSRRGHDVHGDDDDDDDEEEEEEEENDLVDILLRLQKKNRMGFQIDRTIIKALILFCHERTNHCEHLIYINRPTHYQHIITKSTSDHNLEAEANDEFSERNHLPVVHPSHASFLHLTSLSHHIQSSIQTQLKISKKLTTISTKASSNRKSPPTWQPHSPHSPILCPNLWPFDGPPLWESASSCGFKRGSSTDVASAPYGHYWRQVKSICVLHLLSGKKVQRFRRVREEEVMIMVEKVMESCSSLKAVNLTDLFSDVTNDIVCRSVIGRRYEGSVLREPMSKLEEFLGAFVIGDYIHWLDWVGRVNGMHGRAKRVAKQLDEFLDEVVDEHVRMRNHDGDVVNGGDMQNDFVDILLEIQKTSSTTDFQVDRTIMKALIMDMFGAGTDTTLAVLEWAMTELLRHPNVMQKLQDEVRSVGRAKTHVTEEDLNEMPYLKAVIKEILRLHPPSPILIPRESMQDTKVMGYDIAVGTQVLINAWAISTDPSYWDQPLQFQPERFLKNSIDIKGHDFHLIPFGAGRRGCPGIAFAMVVNELVLANTVHQFDWTVPAGVVGDQTFCLCETTGLTVHRKLPLLALASPHMNCSK 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02006 979 Gene3D Cytochrome P450 162 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 Gene3D Cytochrome P450 561 965 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 Pfam Cytochrome P450 174 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 Pfam Cytochrome P450 588 944 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 909 918 IPR017972 GO:0005506|GO:0016705
Vimu8g02006 979 MobiDBLite consensus disorder prediction 535 554 - -
Vimu8g02006 979 MobiDBLite consensus disorder prediction 535 549 - -
Vimu8g02006 979 SUPERFAMILY Cytochrome P450 583 971 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 MobiDBLite consensus disorder prediction 86 122 - -
Vimu8g02006 979 CDD CYP71-like 585 967 - -
Vimu8g02006 979 MobiDBLite consensus disorder prediction 86 100 - -
Vimu8g02006 979 PRINTS P450 superfamily signature 907 916 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PRINTS P450 superfamily signature 777 794 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PRINTS P450 superfamily signature 830 841 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 585 974 - -
Vimu8g02006 979 SUPERFAMILY Cytochrome P450 174 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 MobiDBLite consensus disorder prediction 398 420 - -
Vimu8g02006 979 PRINTS E-class P450 group I signature 225 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PRINTS E-class P450 group I signature 829 847 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PRINTS E-class P450 group I signature 201 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PRINTS E-class P450 group I signature 870 894 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PRINTS E-class P450 group I signature 906 916 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PRINTS E-class P450 group I signature 319 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 PRINTS E-class P450 group I signature 916 939 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02006 979 MobiDBLite consensus disorder prediction 406 420 - -
Vimu8g02006 979 FunFam Cytochrome P450 83B1 579 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02006 Vimu-Chr8 26008166 26018077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02006 585 972 Cytochrome P450 AT3G48310 47.692 1.08e-124 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02006 - - gmx:100813357 621.698