Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02004 ATGACCAGAAAAACCTCACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCACCAACTTGGCACTCTCACTCACCGAACTCTCCGTTCCTTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAAGGTGCCAGTTCTTGTGGTCTCAACGCCCGAGGCAGCTCGTGAGGTTATGAAAACCCATGACCTTATTTTCTCCAATAGACCACATCGTAAGATGTTTGATATCTTCTTGTACGATTCCAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGGCAGATAAAGAGTATCTCTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCTTTTGGTCCAGTGAGAGAAGAGGAAATCTCCATAATGATGGATAAGATTAAGCAGTGTTGTTGTTCTGTGACGCCTGTGAATTTAACTGATTTATTTTCTACGGTCATAAATGACATAGTGTGCAGAGCTGCTCTCGGAAGGAGATACAGTGGAGGAGAAGGGAGTAAGTTTTGGGAGCCAATGGATGAGATGATGAAGATGTTGGGTGCTCCAGTTATAGGGGACTGCATACCTTGGCTTGATTGGGTGGGAAGAGTTAATGGAATGTATGGTAGGGCAAAGAGACTGGCTAAACAGCTTGATGAATTTTTTGATGAAGTTGTTGATGAGCATGTAAGTAGAAGAGGGCATGATGTGCATGATGATGTTGATGATGATGAACAGAATGATTTGGTGGACATGTTGAGGATCCAAAAGATAAACGCCTTGGGGTTCCAGATTGATAAAACAATCATAAAGGCCATAATCCAGTTCAATCCTTACTATCAAAGACGATGTACTGATACCAGCTCCTCAATCCTGGGATGGATAATGACAGAACTCTTGAGGCACCCAAGTGTGATGCAGAAGCTAAAAGATGAGATAAGGAATGTGGTTAGTGGTAGAACTCGCATAACTGAGGAAGATTTATGCAACATGCCTTATTTGAAAGCAGTGATTAAAGAAAGTTTTCGGTTACATCCCCCAGCTCCCTTGTTGGTTCCAAGGGAATCCATGGAAGATGCCAAAGTGATGGACTATGACATTGCAGCAGGCACACAAGTAATAGTTAATGCTTGGGCAATAGCAAGAGATCCTTGTTACTGGGAAAAACCTGAAGAGTTTGAAGCAGAAAGATTCTTAAAGAGTTCAAGAGATGTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCTGGAAGAAGGGGTTGTCCAGGAATAATGTTTGCCATGAATATGATTGAGTTGGTCATGGCAAACCTCGTTCATCAGTTTAATTGGGAAGTGCCAAGTGGAGTAGTGGGGGATCAGACACTCGACATGACTGAATCTGCAGGGTTGACCAGTCATAGAAAATTTCCTCTCATAGCATTTGCCTCCTACAATGCATAA 1443 0.4241 MTRKTSPPSPPKLPIIGNLHQLGTLTHRTLRSFAQTYGPLMLLHFGKVPVLVVSTPEAAREVMKTHDLIFSNRPHRKMFDIFLYDSKDVASAPYGNYWRQIKSISVLHLLSAKKVQSFGPVREEEISIMMDKIKQCCCSVTPVNLTDLFSTVINDIVCRAALGRRYSGGEGSKFWEPMDEMMKMLGAPVIGDCIPWLDWVGRVNGMYGRAKRLAKQLDEFFDEVVDEHVSRRGHDVHDDVDDDEQNDLVDMLRIQKINALGFQIDKTIIKAIIQFNPYYQRRCTDTSSSILGWIMTELLRHPSVMQKLKDEIRNVVSGRTRITEEDLCNMPYLKAVIKESFRLHPPAPLLVPRESMEDAKVMDYDIAAGTQVIVNAWAIARDPCYWEKPEEFEAERFLKSSRDVKGHDFEVIPFGAGRRGCPGIMFAMNMIELVMANLVHQFNWEVPSGVVGDQTLDMTESAGLTSHRKFPLIAFASYNA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02004 480 CDD CYP71-like 36 472 - -
Vimu8g02004 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Vimu8g02004 480 Pfam Cytochrome P450 7 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 FunFam Cytochrome P450 83B1 1 475 - -
Vimu8g02004 480 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS E-class P450 group I signature 58 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS E-class P450 group I signature 152 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS E-class P450 group I signature 34 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 PANTHER CYTOCHROME P450 71B11-RELATED 5 476 - -
Vimu8g02004 480 Gene3D Cytochrome P450 1 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g02004 480 SUPERFAMILY Cytochrome P450 7 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02004 Vimu-Chr8 25994384 25996163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02004 3 477 Cytochrome P450 AT3G48270 49.476 1.10e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02004 - - vum:124838435 761.525