Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01992 ATGTCCAACGAAACAATTGACCCCTACCACCGCCTCCAAATCCAGCCCAACCCCGACGGCACCTTCACTCGCCTCAACGGTGTCGCCATTCCACACACCTTACCCTCTTCAGACCCCTCTCTTCCCATTCCAGTTCTCACCAAAGACATCACCATCAACCCACACAACCAAACATGGCTGCGCTTATTCCTACCACGAACATTACTCTCCTCTTCCAACCCCAACAAGCTTCCTCTCATCCTTTTCTTTCACGGAAACGGATTCGTGCTGCTCAGTGCAGCTTCCTCCGTGTTCCATGATTTCTGCGTCCAAATCGCCGATTCCGCTCATGCCATTGTAGCATCTGTCGACTACCGTCTCGCGCCGGAGCACCGACTTCCGGCGGCCTACGACGATGGCGCCGAAGCGCTGCGGTGGATCGGAAACTGCGAAGATGAGTGGTTACGTCAATACGCTGATTATTCAAGTGTTATCTTATGGGAAATAGCGCTGGAGAAACTATCGCTTATCACACAGCTACAATGTGTAAATGGAGTGGATCAACATGGAGAATTGGTGGAAAATTTGCGGAAAGAGAAGGAAGGAACTGAATTTTGTTTCCTTGCAAGTCTACGTGCAGTTGAAGAGGTGAATGATCTGGATCGAGTGAAGATCCAAGGGTTGATATTGCGTCAACCATTCTTCGGTGGAGTGCAGAGGACAGAATCGGAGTTAAGGCTTGAGAATAACCCACTCATTCCTCTGTGTGTTACGGATTCGATGTGGGAGTTGGCACTGCCAACTGGTGTTGATCGTGACCATGAATATTGCAGTGTAAGGGCTGGAAATGGGGTTGAGAAATTTGAGAAGATGAAGGAGCTTGGTTGGAGGGTGCTGGTGAGTGGCAACAATGGTGACCCATTGGTGGATCGTGATAAGGAGTTGGTGCAATTGATGGAAGAAACAGGAGTGAAAGTGGTGAAGGATTTTCAAGAAGAAAGCTGCCATGGAGTTGAACTCTTTGACCCATTGAAAGCAAACCACTTCATTGATTTGGTTAAACACTTCATTAACCCAATCTCTGTTTAG 1068 0.4841 MSNETIDPYHRLQIQPNPDGTFTRLNGVAIPHTLPSSDPSLPIPVLTKDITINPHNQTWLRLFLPRTLLSSSNPNKLPLILFFHGNGFVLLSAASSVFHDFCVQIADSAHAIVASVDYRLAPEHRLPAAYDDGAEALRWIGNCEDEWLRQYADYSSVILWEIALEKLSLITQLQCVNGVDQHGELVENLRKEKEGTEFCFLASLRAVEEVNDLDRVKIQGLILRQPFFGGVQRTESELRLENNPLIPLCVTDSMWELALPTGVDRDHEYCSVRAGNGVEKFEKMKELGWRVLVSGNNGDPLVDRDKELVQLMEETGVKVVKDFQEESCHGVELFDPLKANHFIDLVKHFINPISV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01992 355 Gene3D alpha/beta hydrolase 197 353 IPR029058 -
Vimu8g01992 355 Gene3D alpha/beta hydrolase 9 160 IPR029058 -
Vimu8g01992 355 PANTHER ARYLACETAMIDE DEACETYLASE 24 331 - -
Vimu8g01992 355 Pfam alpha/beta hydrolase fold 211 331 IPR013094 GO:0016787
Vimu8g01992 355 Pfam alpha/beta hydrolase fold 80 159 IPR013094 GO:0016787
Vimu8g01992 355 SUPERFAMILY alpha/beta-Hydrolases 31 352 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01992 Vimu-Chr8 25804673 25812215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01992 34 270 Carbohydrate Esterase AT1G68620 34.568 2.86e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01992 - - vra:106767967 581.637