Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01949 ATGGCACTTTTGCCATATTCAGAATGCATTGTTCTTTGTGCAACCATTTTTCTCTTCTTCACGTTATCATCATCATCATCAATGTCTCAAGCAGAGCTTGATGCTCATTACTACGATAAAACATGTCCACAGGCAGAGAACATAATTTCAGACACTGTTCTCAGTGCTTCCAAATTTGACCCAAAAGTCCCAGCTCGGATCTTGAGGATGTTCTTCCATGATTGTTTCATAAGGGGTTGCGATGCATCGATATTGCTGGACTCAACTCCCAAAAACCTGGCTGAAAAAGATGGTTCACCTAATCTCTCTGTTCATTCATTCTATGTCATTGATGAAGCCAAGACCAAGCTTGAGAAAGCTTGTCCACACACTGTTTCTTGTGCTGATATAATCGCCATTGCAGCTAGAGATGTGGTAGCACAGTCTGGAGGACCATCTTGGAATGTGCTAAAAGGAAGAAAAGATGGAAGGGTGTCGAAGGCATCAGAAACAGTGAACTTGCCAGGTCCAACCTTAAATGTGAATCAACTAATTAAGAGTTTTGCAAAGAGAGGTTTAGGAGTGAAAGATATGGTGACTCTCTCTGGTGGCCACACTCTTGGATTTTCACACTGTTCTTCTTTTCAAGCAAGAGTTCATAACTTCAGTTTGTTGCATGCTATTGACCCTAGTTTGAACACTGAGTTTGCACTAGACCTGATAAGGAAGTGTCCAAAACTAAACACAAACCCCAATGCTGGACACTTCCTGGACTCAACATCATCGGTGTTTGACAATGATTACTATAGACAGTTGCTGGTGGGAAAGGGTTTGTTCTCATCAGATCAGTCTCTTGTTGGGGATCAAAGAACCAGGTGGATTGTGGAAGCATTTGCCAAAGATCAGGGCTTGTTCTTCAGAGAGTTTGTGGCTTCAATGTTGAAGCTTGGTAATGTGGGAGTCTCTCAAAATGGGGAAGTCAGACTTAATTGCAAGGTTGTCAATTGA 987 0.4205 MALLPYSECIVLCATIFLFFTLSSSSSMSQAELDAHYYDKTCPQAENIISDTVLSASKFDPKVPARILRMFFHDCFIRGCDASILLDSTPKNLAEKDGSPNLSVHSFYVIDEAKTKLEKACPHTVSCADIIAIAARDVVAQSGGPSWNVLKGRKDGRVSKASETVNLPGPTLNVNQLIKSFAKRGLGVKDMVTLSGGHTLGFSHCSSFQARVHNFSLLHAIDPSLNTEFALDLIRKCPKLNTNPNAGHFLDSTSSVFDNDYYRQLLVGKGLFSSDQSLVGDQRTRWIVEAFAKDQGLFFREFVASMLKLGNVGVSQNGEVRLNCKVVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01949 328 ProSiteProfiles Plant heme peroxidase family profile. 32 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 Gene3D - 36 328 - -
Vimu8g01949 328 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 FunFam Peroxidase 168 309 - -
Vimu8g01949 328 Gene3D Peroxidase, domain 2 168 309 - -
Vimu8g01949 328 Pfam Peroxidase 56 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 PANTHER - 15 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 CDD secretory_peroxidase 32 327 IPR033905 GO:0004601|GO:0042744
Vimu8g01949 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Vimu8g01949 328 SUPERFAMILY Heme-dependent peroxidases 33 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu8g01949 328 FunFam Peroxidase 36 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01949 Vimu-Chr8 25256484 25259000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01949 29 328 Peroxidase AT5G51890 70.764 3.46e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01949 K00430 - gmx:100795422 543.888