Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01942 ATGTCCCTCTTCTCTTTCTCACATTACAAATTCCTTTGGAGATGTTCAATTGCATTTGCATTTTTCTTAACCCTTTTCTTCATTGCAAACTCACTCACTCTCCAAGCTCAATCCACTTCAACCCCATGCAACAAAGACCCCTACAAGCAACTCAATCTAATCCTTAACCAAAACGGCACCGTCACACGCCCCGACAAACCCCCCGACAGCCCGCCCGCAGCCGATCCCACTCTCCTCGTACTCTCCAAAGACCTCTCCATCAACCCATCCAAGGGCACCTGGGCGAGGCTGTACCTGCCCCGCGCAGCACAGCATCAACGCTCTAAGCTCCCCCTCGTGCTTTTCTTCCATGGTGGAGGGTTCATTTTCCTCAGTGCAGCCTCAACGATCTTCCACGAGTTTTGCTTCAACATGGCAAACGACGTCGTCGCGGTCGTAGTATCCCTGGAGTACCGTCTTGCACCGGAACATAGACTCCCCGCGGCGTACGATGATGCCGTGGAGGCGCTGCAGTGGATAAAAGCCAGCCAGGATGATTGGCTTAAAAACCTCGTCGATTACTCCAATGTTTTTCTCATGGGGAGTAGTGCCGGGGGAAATATCGCCTACAACGCCGGTCTACGCGCAGCTGCGGCTGCCGACTATCAGATTCCCAAGATCAAAGGGCTTATTTTGGTTCAACCTTTTTTCGGTGGGACCCAAAGGACAGGTTCGGAGCGGAGGCTGGCGAACGAACCTCATTTGGGGCAGTGCTTTAATTACGCGATGTGGGAGTTGTCGTTACCGGTTGGGGTTGACCGTGATCACGAGTATTGCAATCCGACGGCGGGGAACGGTCCTGCGAGATTGGAATTGATCGAAAGGGTTGGATGGTGGGTACTGGTCACCGGGTGTGGAGGTGACCCGCTGGTGGATCGTCAGGTGCAGCTGGTTAAGTTGATGAAAAAGAAGGGTGTGAAAGTTGTGGGGCATTTCAGCCCAGGGGATTATCATGGGATTCAAGATAGTGATCCATTGAAGGCAAAGGAGCTATACAGAGTAATCAAAACTTTCATTTCAGCTTTGAATTATGCTCAAGAGTAA 1083 0.5162 MSLFSFSHYKFLWRCSIAFAFFLTLFFIANSLTLQAQSTSTPCNKDPYKQLNLILNQNGTVTRPDKPPDSPPAADPTLLVLSKDLSINPSKGTWARLYLPRAAQHQRSKLPLVLFFHGGGFIFLSAASTIFHEFCFNMANDVVAVVVSLEYRLAPEHRLPAAYDDAVEALQWIKASQDDWLKNLVDYSNVFLMGSSAGGNIAYNAGLRAAAAADYQIPKIKGLILVQPFFGGTQRTGSERRLANEPHLGQCFNYAMWELSLPVGVDRDHEYCNPTAGNGPARLELIERVGWWVLVTGCGGDPLVDRQVQLVKLMKKKGVKVVGHFSPGDYHGIQDSDPLKAKELYRVIKTFISALNYAQE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01942 360 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 113 129 IPR002168 GO:0016787
Vimu8g01942 360 PANTHER ARYLACETAMIDE DEACETYLASE 55 332 - -
Vimu8g01942 360 SUPERFAMILY alpha/beta-Hydrolases 67 339 IPR029058 -
Vimu8g01942 360 Gene3D alpha/beta hydrolase 48 356 IPR029058 -
Vimu8g01942 360 Pfam alpha/beta hydrolase fold 113 333 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01942 Vimu-Chr8 25116281 25118345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01942 57 337 Carbohydrate Esterase AT5G16080 38.014 1.08e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01942 - - gmx:100792597 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03130 3 45070434 45073764 Vimu8g01942 8 25116281 25118345 PCT