Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01933 ATGAGATTCTTGGAATTCCATAGTGATCCAATGTCTGCAATTGCAACCTTTGCAGCTATAGCTTTAACAGTCTTTCTCATATTCAGAAGTTTCATCTGCAAGAAAGGAAGGTACCATGTGGTTGAGGGAACTATGTTAGAACTGTTGCTCAACTTCCGCAATCTGCACGATTACATGACTGATCTTGCCAGAAAACACAAGAGCTACCGGTTGCTTTGGTTTCGCAGGAGTGAAATTTACACTGTGGACCCTGTCAATGTTGAATACATCCTCAAAACAAACTTTGCAAACTATGAGAAGGGCTGGTACCACTATGAGAAATTGACAGATCTTTTAGGTGATGGAATATTCTCAGTGGACGGCGAGAAGTGGCGACATCAGAGAAAGGTTTCGAGCTATGAAATTGGCACCAAAGCAGTGAGAGATTTTAGCCTTGAAGTGTTCAAATCCAATGCAGTAAAACTTGCAGTAGTTGTTTCAAAAACAGCCATGTCAAATAATGCAGTTGACTTCCAAGAACTGTTTATGAAATCAACCTTAGACTCGGTCTTTAAGATTGTCCTTGGAGTAGACTTGGACACCATATACGGAACATACGAAGAAGGCACTCAATTCTCCAATGCCTTTGACGAAGCAAGTGCTATAACGTTGTATCGGTATGTCGATGTTTTATGGAAGATCAAGCGTTTTCTCAACATTGGATCAGAGGCAGTACTCAGAAACCGTATTAAAGAGGTGGATGATTTTGTTTACAAACTAATCAGAATCAAGACAGAGCAAGTGCAGAAGTCATCACAATCTGATTTTTCTGAGAAAAAAGCAGATATGGTGTCAAGGTTTCTGGCATTGAATGAGACAGATCCTAAGTACCTAAGAGACATTATTCTCAGCTTCGTGATTGCAGGAAGAGATACAACAGCTGCTACTCTTTCCTGGTTCTTTTACATGCTATGCAAGCATCCTCATATCCAAGAAAAAGTTGTGCATGAAGTTGGAGAAGTAACAAAGTTGAAGAACACTTGTAGTATTGATGAACTTGCAGATAGCCTAACCGATGAGGCCCTGGGAAAGATGCACTTTTTGCATGCAGCTTTGACTGAAACACTCAGACTTTACCCTGCCGTTCCAATTGATGGAAAACTTTGCTCATCAGATGAAACTTTACCTGATGGATTTAGAATTAGGAAAGGTGACTCTATATCATATCAGTCATATTCCATGGGTAGGATGGAATTCATCTGGGGTGAAGATGCAGAGGAATTTCGACCAGAGAGATGGCTTGATGAAAGTGGAACTTTTCAACCAGAGAGTCCTTTCAAGTTCACAGCTTTTCAGGGCGGTCCAAGAATTTGTCTGGGGAAAGATTTTGCATACAGGCAGATGAAAGCTTTTGCTGCTGTTCTTTGTCACAGCTACAAATTCAAGCTGGCTGTCCAAAATGAATCGGTGAATTATAAGACTATGCTCACTCTTCACATTGACGGTGGTCTTCATCTGCATGCTTCTCAAAGATTCGAGCTTATGGCTTAG 1530 0.4085 MRFLEFHSDPMSAIATFAAIALTVFLIFRSFICKKGRYHVVEGTMLELLLNFRNLHDYMTDLARKHKSYRLLWFRRSEIYTVDPVNVEYILKTNFANYEKGWYHYEKLTDLLGDGIFSVDGEKWRHQRKVSSYEIGTKAVRDFSLEVFKSNAVKLAVVVSKTAMSNNAVDFQELFMKSTLDSVFKIVLGVDLDTIYGTYEEGTQFSNAFDEASAITLYRYVDVLWKIKRFLNIGSEAVLRNRIKEVDDFVYKLIRIKTEQVQKSSQSDFSEKKADMVSRFLALNETDPKYLRDIILSFVIAGRDTTAATLSWFFYMLCKHPHIQEKVVHEVGEVTKLKNTCSIDELADSLTDEALGKMHFLHAALTETLRLYPAVPIDGKLCSSDETLPDGFRIRKGDSISYQSYSMGRMEFIWGEDAEEFRPERWLDESGTFQPESPFKFTAFQGGPRICLGKDFAYRQMKAFAAVLCHSYKFKLAVQNESVNYKTMLTLHIDGGLHLHASQRFELMA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01933 509 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 Pfam Cytochrome P450 47 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 SUPERFAMILY Cytochrome P450 40 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PANTHER CYTOCHROME P450 27 497 - -
Vimu8g01933 509 CDD CYP86A 69 497 - -
Vimu8g01933 509 Gene3D Cytochrome P450 39 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01933 509 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01933 Vimu-Chr8 24983323 24985771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01933 13 504 Cytochrome P450 AT2G45510 52.495 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01933 - - twl:119985375 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01933 8 24983323 24985771 Vimu8g01933 8 24983323 24985771 ECH
Vimu8g01933 8 24983323 24985771 Vimu3g03140 3 45167569 45168657 PCT