Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01929 ATGATCAAGTTTGTTTTTTTCTTGTTATGCTCTTATTTTGTAACATCTGCAGTGAGTCTATCAGTTTCAGAGTCCGAAGCTGTTTCTGTGAAACTTCATGCAGCTGAATCCTTCTCTGCTGGGTATATTCAGATGAAAACTGCATCAAACTGCTCTTACTTGGTGCTTATAAGCACGAGTTGTTCATCGCCCAAGTTCACGACGGATAAGATCAGTATTGCGTTTGGAGATGGTAAAGGAAACCAGGTGTATGTACCAAGACTAGATGATCCACTTGCAAAGACATTTGAACAATGTTCTTCAGACACATTTCAGATAGATGGTGCATGTGCATCTCCCATCTGCTTTGTGTATCTTTATAGATCAGGTGCAGAGCAAGGTTGGAAGCCTGAGAGTGTGAAAATCTTTGGCTATGACTCAGAGCCTGTTACTTTTACTTTCGACACCTCCATTCCCAATGACACATGGTATGGCTACAATCTGTGCCAAGCTCCTCCTTCTCCTTCTTCTTCATTCCAACTATCACCTCAGAAATGGCACATGAGTTTGCTTCTAGGCTTTTTTCTTAGCCTTCTGCTTTAA 582 0.4141 MIKFVFFLLCSYFVTSAVSLSVSESEAVSVKLHAAESFSAGYIQMKTASNCSYLVLISTSCSSPKFTTDKISIAFGDGKGNQVYVPRLDDPLAKTFEQCSSDTFQIDGACASPICFVYLYRSGAEQGWKPESVKIFGYDSEPVTFTFDTSIPNDTWYGYNLCQAPPSPSSSFQLSPQKWHMSLLLGFFLSLLL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01929 193 Gene3D PLAT/LH2 domain 32 157 - -
Vimu8g01929 193 Pfam Embryo-specific protein 3, (ATS3) 44 162 IPR010417 -
Vimu8g01929 193 CDD PLAT 51 162 - -
Vimu8g01929 193 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 5 167 - -
Vimu8g01929 193 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 159 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01929 Vimu-Chr8 24919245 24920580 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01929 - - gmx:100305526 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01929 8 24919245 24920580 Vimu8g01929 8 24919245 24920580 ECH
Vimu8g01929 8 24919245 24920580 Vimu3g03141 3 45169988 45187588 PCT