Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01927 ATGCAGAAGAAAATGATGAAGCAGGTTCTTCTTTTCTTCTGCTTTGCCTCTGCATTATCCCTTTCAGTCTCAGAATCCAAATCTAATTCTCTTCAAAATCCTGCAATCGATTCCTTCTCTTTTGGCTATATTCAGACGAAGACCCCACAGAACTGTTCTTACCTTGTAATTATATCTACAAGGTGTTCATCACCCAAGTTCACATGGGAGAAAATCGGAATTGCTTTTGGAGATGCTCATGGCAACGAGCAGGTATACAAAGAAAGATTAGATGGTCCAGGCACATTCGAGCAATGTTCTTTAGATGTATTTGAGATAAATGGGGCATGTTTATCCGATATTTGTTTTCTGTGGCTATATAGATCTGGTGCAGTAGATGATTGGAAACCTCAGTCAGTGAAAATCTCCTGCAACAATGCATGTTTTCCCATCTTCAACATACACTTCAATATAAACTTCTCCCTCCCTGATGCTGCCTGGTATGGCTACAAATGGTGTAATAGTGATCCACCATATCTGGCAAATGGCTTTCCCTTCCCAACTGGTGTTGTTTTCTTTTAA 561 0.3993 MQKKMMKQVLLFFCFASALSLSVSESKSNSLQNPAIDSFSFGYIQTKTPQNCSYLVIISTRCSSPKFTWEKIGIAFGDAHGNEQVYKERLDGPGTFEQCSLDVFEINGACLSDICFLWLYRSGAVDDWKPQSVKISCNNACFPIFNIHFNINFSLPDAAWYGYKWCNSDPPYLANGFPFPTGVVFF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01927 186 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 4 169 - -
Vimu8g01927 186 Pfam Embryo-specific protein 3, (ATS3) 45 166 IPR010417 -
Vimu8g01927 186 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 49 153 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01927 Vimu-Chr8 24901036 24903232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01927 - - vun:114182405 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03181 3 45616022 45617040 Vimu8g01927 8 24901036 24903232 PCT