Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01922 ATGATGACGGCGATTCTCGGCCCGAAGGAGCGGCGGGCTTTTGGGCTTTGGTGCTGCGTTGTGTGCCTCGCGATCTGCGCTAGGGTTTGCAGCGCGGCCAGATCGGACAAGGAAACGCGCGAGAGGTTCTACGGAAACATAGCCAATTTGACGTCGCCCGAATCCAACAACACCTTGGCCAAGATGTTTGATCGCGTTCTCGAGAAGGAGTTTTCTGAGAATGACCAACCAGAAGGAAGTAACTCGGTGTTTGTGTTAGAGAACAGAACACGCTACTTGCTGGAGAGTCTGAAAGACAAATACGAACTTGTAGTTGTGATGGAGGGAGGATCACATTTACAGTGCACAGGATTACCGGCTATTTCAGAGGGTGGTGTGGATAGTGCCATTCTCATTTGTCAGGGCAAGCTGGTGCTTTTCGTGCTTAGGGTTGGTTGGAATGCAATTTGGGATTGGCAAGTGTGCTTGGGTAGATTTATGGTTGACGGGGTTCTAGACTTGGAACTTCTTATGGAAGAGGTCAGTGAGCATGTGCAGTGGAGATTGGTGTGTGTGTGTGTGGGGGGGATTTACTCGGACAATTCACCTCCTTCTCGATCTTACTTCACCGTTCTGCCATTTCTCGGGGAATCTGACAAAAGCAGCTTCAATAGCAGTGTAGCAGATCAGCAGGCTGTATTGGAGACTGTAGCTAAAATTACTCATGAGAAATCAAAGAGAAATGATACACATGAGGGAAATGCTACGAGAGCATTTCAGTTTCAGGATGTGTTCTCACTGGAAAATGAAGATTCCGATGATGTGACAACTTTGATTGATAAAAAGGACAATGTCTTCGTCATGTCTAACAAGAAATCCAAATATCCTGTGCTCCAAGTGGATTTGAGGCTAATATCAGATTTGGTGGTTGTAATAGTTTCAGCAGCCATTGCTGGGATTGTCTTTTCATGTTTGGGACAACCGGTTATCGTGGGCTATCTTCTTGCAGGCTCACTTATTGGACCTGGCGGTTTGAAATTTATCAGTGAAATGGTGCAGGTTGAGACTGTTGCACAATTTGGTGTAGTGTTTCTTCTCTTTGCTTTGGGGCTGGAATTTTCCCTGGCAAAGTTAAAAGCTGTGGGGGCTGTTGCTGTTCTTGGAGGACTACTTCAAATTGTCATTTTTATGTTCATGTGTGGCATTCTTTCCATGTTATTTGGAGCCTCATTGTCTGAAGGTGTTTTTGTGGGTTCCTTTCTGTCCATGTCATCAACAGCAGTAGTGGTGAAGTTTTTGGTGGAGCGAAATAGTAGTAATGCTCTTCATGTTCAAATTACAATTGGGACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGCCTTTTACAAGGAATAATGTCAATGGGGAGACTGCTGCTAGTGTTGTCTTTGTACATCACTGCTACATCCATATTGTCATGGTCATTTGTTCCTCGGTTTCTTAAACTGATGATGCGGCTGTCATCTCAGACTAATGAACTTTATCAGCTAGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTAGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCCACAACAGACTTCGGTCAACATACTTTGGACCAGGTGGAACCAATTCGTAACCTATTTGCAGCTCTCTTTCTCTCGAGTATTGGAATGCTTATACACGTGCATTTCCTTTGGAACCATGTGGATATCCTGCTGGCATCTGTTATTCTGGTTGTAGTCGTTAAAACTGCTGTTGTTGCTATAGTCACCAAGGCCTTTGGTTATAGCCTTAAGACGGCATTTATTGTTGGTATCTCGCTTGCCCAAATAGGTGAATTTGCTTTTGTCCTCCTGAGTCGTGCTTCAAATCTTCACCTTGTTGAGGTTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCGACCCCTTCTGGGAAAATGTATCTTCTTCTTCTAGGGACAACGGCTCTCAGTCTGGTTACAACTCCACTTTTGTTTAAATTGATACCTGCTGTCATGAATCTGGGTGTTCTCATGCACTGGTTCCCCTCTGAAAGTACAACACAAATTGAGGTGTCTCTCTTTATTTCTCCCTTTTTGATGGCCTCGTATATATGA 2181 0.4457 MMTAILGPKERRAFGLWCCVVCLAICARVCSAARSDKETRERFYGNIANLTSPESNNTLAKMFDRVLEKEFSENDQPEGSNSVFVLENRTRYLLESLKDKYELVVVMEGGSHLQCTGLPAISEGGVDSAILICQGKLVLFVLRVGWNAIWDWQVCLGRFMVDGVLDLELLMEEVSEHVQWRLVCVCVGGIYSDNSPPSRSYFTVLPFLGESDKSSFNSSVADQQAVLETVAKITHEKSKRNDTHEGNATRAFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIAGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGAVAVLGGLLQIVIFMFMCGILSMLFGASLSEGVFVGSFLSMSSTAVVVKFLVERNSSNALHVQITIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIMSMGRLLLVLSLYITATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVVVVKTAVVAIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVEVFALSLSLSLSLPPTPSGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPSESTTQIEVSLFISPFLMASYI 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01922 726 Gene3D - 295 696 IPR038770 -
Vimu8g01922 726 Pfam Sodium/hydrogen exchanger family 302 688 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu8g01922 726 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 211 710 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01922 Vimu-Chr8 24876336 24885109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01922 33 81 Antiporters AT5G51710 72.000 3.11e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01922 K26735 - gmx:100810302 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01922 8 24876336 24885109 Vimu8g01922 8 24876336 24885109 ECH