Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01860 ATGTGGAACTGTAACAAGGATGCTGTACAAAACCCCTTTTGTAAGTCTTTGAAGACTGCGATCATGGCTAATTTGCTGACACTGCTTTTTTATGTGGAGATGATAGTGGTGAGTGGTTTCAGTTTGGGAGCAAGTGGCTTGAACATGAACTACTACTTGTTGAGTTGCCCTTTGGCTGAACTTATTGTTAAGAACACAGTCAACAGAGCTCTGCAGAATGATCCCACTCTAGCAGCAGGGCTTGTTAGAATGCACTTCCACGATTGTTTCATAGAGGGATGTGATGGTTCAGTTCTGATCGATTCCACTAAGGACAACACAGCAGAAAAAGATTCACCAGCAAATTTGAGCTTGAGGGGCTATGAAGTAATAGATGATATCAAGGAAGCGCTTGAAAATCAATGCCCAGGAGTCGTTTCATGTGCTGACATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGTCCTGTGTATGACATACCAAAAGGTAGGAAGGATGGAACAAGGTCCAAAATTGAGGATACCATCAATCTTCCTGCACCCATTTTCAATGCTTCTCAGCTCATCAAGGTGTTTGGGCAACGCGGGTTTTCAGTAAAAGACATGGTGGCTCTCTCAGGAGCTCACACATTAGGAGTGGCAAGGTGTTCTTCATTTAAGGAGAGACTTACCCCACTGGATCCATCTTTGGACTCACAATTTGCGAAGACGCTCTCCAAGACATGCAGTGCTGGTGACAGTGCAGAGCAACCCTTTGACTCCACCAGGAACGATTTCGACAACGTATACTTCAACGCTCTGGTCTCAAACAACGGTGTTCTCACATCAGACCAAACGTTGTACACTACCCCACAAACCAGGAACATTGTGAACACTTATGCAATGAACCAAGCCTTGTTCTTCTTGGATTTTCAACAGGCGATGGTGAAGATGAGCAAGCTCGATGTCAAAGAACGATCCAAAGGGGAAGTTCGAAAAAATTGCCATAAAATAAACTGA 1008 0.4435 MWNCNKDAVQNPFCKSLKTAIMANLLTLLFYVEMIVVSGFSLGASGLNMNYYLLSCPLAELIVKNTVNRALQNDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEALENQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPAPIFNASQLIKVFGQRGFSVKDMVALSGAHTLGVARCSSFKERLTPLDPSLDSQFAKTLSKTCSAGDSAEQPFDSTRNDFDNVYFNALVSNNGVLTSDQTLYTTPQTRNIVNTYAMNQALFFLDFQQAMVKMSKLDVKERSKGEVRKNCHKIN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01860 335 ProSiteProfiles Plant heme peroxidase family profile. 46 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 FunFam Peroxidase 50 189 - -
Vimu8g01860 335 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 Gene3D - 50 335 - -
Vimu8g01860 335 Gene3D Peroxidase, domain 2 182 314 - -
Vimu8g01860 335 Pfam Peroxidase 63 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PANTHER PEROXIDASE 25-RELATED 31 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601
Vimu8g01860 335 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu8g01860 335 CDD secretory_peroxidase 46 334 IPR033905 GO:0004601|GO:0042744
Vimu8g01860 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Vimu8g01860 335 FunFam Peroxidase 182 314 - -
Vimu8g01860 335 SUPERFAMILY Heme-dependent peroxidases 46 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01860 Vimu-Chr8 24351159 24353183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01860 13 335 Peroxidase AT4G33420 72.755 1.48e-174 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01860 K00430 - gmx:100809245 577.4