Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01843 ATGGCTGCACCCACCAAACCAACCATTCCATGGAAGCTCCGTGTAACGACATCTCTGCTTTCTCTCCTTCTCAAAGCCTCTCGCCGCTCTAACGGCACCGTCAACCGCCGTCTCTTCAACCTCTTCGACCCCCAGCTCCCTCCTAATCCCAACCCTATCGACGGCGTCACCACCTCTGACGTCACTGTCGATGCCACACGCAACCTCTGGTTTCGCCTCTTCTCCCCCACCACTTCCTCCTCTGCCGCCACCCTTCCTGTCGTCGTCTTCTTCCACGGCGGCGGCTTCACGTTCCTCTCCCCGGCCACAACCAGGTACGACGCTTTCTGCCGCTCCCTGTGTCGCTCCATCAACGCCGTCATCGTCTCCGTTAACTACCGCCTAGCTCCCGAACACCGTTACCCTTCCCAAAACGACGATGGTTTCGACGTCGTTAAATACCTCGACGAAAACGGCGCCACTTTGGGTAATGTTGGTAAGTGCTTTTTAGCGGGTGATAGTTCGGGCGGGAACACAGCGCACCACGTGGCAATTCGGGTTTGCAAAGAGAGGCTCCGATTCGTTAGAGTAATCGGGTTGGTTTCGATTGAACCGTTTTTTGGAGGGCAAGAGCGAGTCGAATCAGAGATCCGAATCACGCAAGACCCGTTGGTTTCGTTGGATGCTTCCGATTGGTATTGGAAGGCCTTTCTGCCCAACGGGTCGGATCGTGACCACGAAGTGGTTAATGTGAGTGGGCCAAATGCGGTGGACATTTCCGGTTTGAACTATCCGAAGACGCTTTTGGTTGTGGCGGGTTTTGACCCATTAAAGGATTGGCAAAGAAGATACTCTGAATGGTTAAGAAAATCGGGTAAGGATGTTGAAATAATTGAATACCCGAAAATGATCCATGGGTTTCACTTGTTTCCATATTTACCCGAATTTTCTGAGTTTCTTTCTCATGTTAGTCATTTCATTGTCAAACAAGTAGCTGGTAGTTAG 984 0.5173 MAAPTKPTIPWKLRVTTSLLSLLLKASRRSNGTVNRRLFNLFDPQLPPNPNPIDGVTTSDVTVDATRNLWFRLFSPTTSSSAATLPVVVFFHGGGFTFLSPATTRYDAFCRSLCRSINAVIVSVNYRLAPEHRYPSQNDDGFDVVKYLDENGATLGNVGKCFLAGDSSGGNTAHHVAIRVCKERLRFVRVIGLVSIEPFFGGQERVESEIRITQDPLVSLDASDWYWKAFLPNGSDRDHEVVNVSGPNAVDISGLNYPKTLLVVAGFDPLKDWQRRYSEWLRKSGKDVEIIEYPKMIHGFHLFPYLPEFSEFLSHVSHFIVKQVAGS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01843 327 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 88 104 IPR002168 GO:0016787
Vimu8g01843 327 Gene3D alpha/beta hydrolase 2 325 IPR029058 -
Vimu8g01843 327 Pfam alpha/beta hydrolase fold 88 301 IPR013094 GO:0016787
Vimu8g01843 327 PANTHER ARYLACETAMIDE DEACETYLASE 36 303 - -
Vimu8g01843 327 SUPERFAMILY alpha/beta-Hydrolases 6 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01843 Vimu-Chr8 24266419 24267953 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01843 6 320 Carbohydrate Esterase AT3G63010 38.024 2.70e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01843 - - vra:106762998 641.343