Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01838 ATGAAGGTGAACGTGAAAGGAGGGTGCAGGAAGAAAATATTGGAAAAAAGTTATATGGCGGGCCCATTGGGCCTTACAGATCCAACTATTTGGCATGATCTCCGGCAACTTCTCTTCCGGCGCCGCCGCTATCTTCGCTTTTATCTTTGCCGTGACCTTCCATTCCTAAGCGCTGCATTAGGACTTCAGTTTGAAAATAATTGTGAAGTTGGAGTCTTCTCTAAACTTACCAATGCCTACTGCTTGGTTGCCATTGGAGGTTCTGAAAGCTTCTACAGTGTATTTGAAGCTGAGTTAGCTGATGTTATCCCTGTGGTCAAGACATCAATTGGGGGTACTCGGATTATTGGTCGTCTTTGTGCCGGTAATGAAACAAGAATGGGCTTCTCCTGCCCCATACCACCACAGATCAAGGCTTTGGACTTCCTGTCTTCCCAAACGGAAATTCATCCTATTGACTCTGGGAATGAAATATGTCAAACGGTTACTCAACATCTGATTGATGATTCTGGGGGCTGTTAG 522 0.4521 MKVNVKGGCRKKILEKSYMAGPLGLTDPTIWHDLRQLLFRRRRYLRFYLCRDLPFLSAALGLQFENNCEVGVFSKLTNAYCLVAIGGSESFYSVFEAELADVIPVVKTSIGGTRIIGRLCAGNETRMGFSCPIPPQIKALDFLSSQTEIHPIDSGNEICQTVTQHLIDDSGGC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01838 173 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 61 124 IPR002769 GO:0042256|GO:0043022
Vimu8g01838 173 Pfam eIF-6 family 62 125 IPR002769 GO:0042256|GO:0043022
Vimu8g01838 173 SUPERFAMILY Pentein 61 127 - -
Vimu8g01838 173 SMART eIF6neu2 60 173 IPR002769 GO:0042256|GO:0043022
Vimu8g01838 173 Gene3D - 59 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01838 Vimu-Chr8 24214838 24219833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01838 59 124 Eukaryotic Initiation Factors Gene Family AT3G55620 89.394 2.10e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01838 K03264 - gmx:100813909 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01838 8 24214838 24219833 Vimu3g02340 3 37950874 37954373 PCT