Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01826 TTGATTCTTCAAAAAAACCTAACTAATAACTGTAGACTTGTTATTTTGCAGAATTCAAAGGTTTTGAGACACTTGATTCTCAAAGGTTGTAAAAATATTAGACGAATACCTGACATCTCTGGTTTCCCCAATTTGACAGAACTTTGTGTTGGTGAATGCACAAATCTGTTTGAGATTCATGATTCAGTTGGATCTTTACTTAATCTTAAAGAGTTCTGTGCTGAAGGATGTACCAAGCTCACAATTTGTCCAAGTCGCATAAAGTTGATATCTTTGGAACATCTGTGCCTTCGGGGATGCAGCAGTCTTGTTACGTTTCCAGAAGTATTGGCACCAATGAACAAACTAACACACGTTGACTTGGGAGGAACTGGCATAAGAAATCTGCCACTATCAATGCAAAATCTTAAGGGTATTCAATTATTGTCCCTGGGGAAAGGCAAAATGTTTGAAATTAATGAATCGTCCAATTTCTTTCAAAACCTGCCAATGTTCTTTCCTAATTTAACAACATTATCTCTACAAAACTTAGACATTACAATCCGTCCTGCCAGCTTTGAAGAATGTCACTGTTTGAAATTTTTGCTCGTCACCAACTGCAAGAAGCTTCAAGAAATTAGAGGACTTCCATTGAGTATTAAGGAGTTCTCCGCAGCAGACTCTCCAGTTGAGGCCAACTCATTGACATTAAAACTCAGGCAGGCCATTGATTCAGCAGTAATGAGAACCTGTGTTCTTCCAGGTCGGAAAATCCCAGAATTGTTTGACCACTCTAGCAAGGGAAACTCTCAACGTTTCTGGTTTCGTAAAGAATTGCCCACTCTCGCTGTGTGTGCTATTATTGGAATCTGGGATAATGTCAAGCCTCCTTTCATTGTCTGGTTTAGTTTCCGTGTTAGTGTAAACAATAATATTGATGATTGTGTTTCTTGTTTTTGTTGTGGTAATATATGTTGGACAACTGAATGTAGTCACATAATTATACTCAACCTTCAAAATGATTTTCAACATCCATTGAATTCGGATATTCAGAAAGCACTTCTGACGAATGAGTGGATTCCTGGGGAAATACTGTTGAGGATACATCCACAAAGTGATTTACGTAAGTCGGGAGAAATCAGAAGGACAGGAGTTTATGTAAATCGAACACTTAGTAGAATGGAGGATGTTCGATTCGAAGATCCTTATGATCTCAATAAAGCAAGTACTATGGAAAATAAACTTGTGTTGGTTGGTGAGGCATCTGATAAAAAACAACAGGAACAATCCTCTGCTTTATTCAACCCCACAACCTCATTAGAATCTGTTATTGGTGAACAACCTTTGAATTATGAGTACAACAATTCAGATTCAAAAGATTCGGCATCCACTGTTGACTCCAATAACCAAGAAGGAGTACTTGTAGATGATCAACCAATATTAGCTCCAAGTTCTGCAGAGACGCAAATTGCTGAGGCCAAAAGAGAAATGGCACCACTGATATCGGAAGTTTCAAGTGAGTTCACTGCTCAAGTAAGTATAAAAATGGAGTCAACAGCATCCCAATCACCTAAAGTTGATGAAGTAGAAGCAGGTTTGGAAACTCAGAATCAGTTCAGAAATACTATGGTTTTGGAAAACCAGATACACCAAAGGCTGACCAGGATTAAGAAAATGAAAGAAGAATTAGGAGAGAAACTCAGTGCTATGAAAGCCGACATCTCTGCCATTGAAGCTAACAACTCTTCCATTAAAGCTAACATCTCTGACATTAAAGCTATATTTCTGCAGACTGATCAGAGGTACAACAATTGA 1794 0.3813 MILQKNLTNNCRLVILQNSKVLRHLILKGCKNIRRIPDISGFPNLTELCVGECTNLFEIHDSVGSLLNLKEFCAEGCTKLTICPSRIKLISLEHLCLRGCSSLVTFPEVLAPMNKLTHVDLGGTGIRNLPLSMQNLKGIQLLSLGKGKMFEINESSNFFQNLPMFFPNLTTLSLQNLDITIRPASFEECHCLKFLLVTNCKKLQEIRGLPLSIKEFSAADSPVEANSLTLKLRQAIDSAVMRTCVLPGRKIPELFDHSSKGNSQRFWFRKELPTLAVCAIIGIWDNVKPPFIVWFSFRVSVNNNIDDCVSCFCCGNICWTTECSHIIILNLQNDFQHPLNSDIQKALLTNEWIPGEILLRIHPQSDLRKSGEIRRTGVYVNRTLSRMEDVRFEDPYDLNKASTMENKLVLVGEASDKKQQEQSSALFNPTTSLESVIGEQPLNYEYNNSDSKDSASTVDSNNQEGVLVDDQPILAPSSAETQIAEAKREMAPLISEVSSEFTAQVSIKMESTASQSPKVDEVEAGLETQNQFRNTMVLENQIHQRLTRIKKMKEELGEKLSAMKADISAIEANNSSIKANISDIKAIFLQTDQRYNN 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01826 597 Gene3D Ribonuclease Inhibitor 88 222 IPR032675 -
Vimu8g01826 597 Gene3D Ribonuclease Inhibitor 5 87 IPR032675 -
Vimu8g01826 597 Coils Coil 546 573 - -
Vimu8g01826 597 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 8 117 - -
Vimu8g01826 597 SUPERFAMILY L domain-like 15 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01826 Vimu-Chr8 24098392 24100337 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01826 22 220 WRKY Transcription Factor Family AT4G12020 32.020 6.30e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01826 - - vum:124821418 961.059