Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01801 ATGAGAGAGAATATTTCAGAAACTTGGCTAGTTTTGATCTCAGTGATATTAGTCACGGCCATATTTGCAAAAATAATTCTATTCAAGTTAGGGAAGGAAGATAAAAGGAAATGCAGATTGCCACCAGGAAGGAGAGGGTGGCCTTTGATTGGAGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAGAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGCAAATGGGCAGTGGTGTCTGCAGATCCAAGCTTCAACCGCTTTGTAATGCAGAATGAAGGAAGATTATTCATTTCCAGCTACCCAAAATCTTTCAGAGATTTGGTTGGGAAAAATGGTGTGATCACTGTGCAAGGAGAGCAACAAAGGAAGCTACACGGAATTGCCTCCAATATGATGCGTCTGGAGAAGCTTAAGTTCCACTTCTTGAATGATATCCAAAAGGTCATGGTCCAAACTTTGGGCAATTTTAACAACAACCAAGTCATTCTTCTCCAAGATGTTTGTAGGAAAGTGGCTATACATTTAATGGTTAATCAACTATTGGGGGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCTCAGTTGTTTTCTGACTTTGTTGATGGTTGTTTATCCATTCCTATCAACATCCCTGGATATGCATACCACACTGCTATGAAGGCAAGGGAGAATATCATAAGCAAGATAAACAAGATCATTGAGGAACACAGACAAAATGGTGCTCCAACGGAAGGCAGTGGTGTACTTGGAAGATTGCTAGAGGAAGAAAGCTTGCCAGATGATGCTGTTGCGGACTTCATTATCAATCTTCTCTTTGCCGGAAATGAAACAACAACCAAAACAATGCTCTTTGCAGTCTATTTCCTTACTCAATGTCCTAGAGCCATGAAGCAGTTGCTGGATGAACATAGTTCACTGAGGCGTGATTCTGCAGATGAATTGCTCACATGGCAGGACTATAAAGCAATGCCATTCACTCAATGTGTCATTGATGAAACACTGAGACTTGGGGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACGTTCAATACCAAGCAGTCCATTTAGATGAGAAAGTATACAGTGGAGCTCTAGAGTTCAATCCTTGGAGATGGATGGAACATGAAAATGAGGAAAAGAGAAACTGGAGAAGTAGTCCATTCTATGCACCATTTGGTGGAGGTGCCAGATTCTGTCCAGGAGCAGAGCTGGCACGACTTCAAATTGCTCTTTTTCTTCATTACTTTGTTACTACATACAGGAATCAAATCCAATTTCAGACTCTCGACGTTCTCTTCTCTCATCACTTCCCACTATCAAAGGCAATTTTGCAGAGTAAAAAGCGATGGCAGGAAGAGAAGTTAGAGAATACACAAATCTCAGCGACCCCAAAGATAAGAAATGGGGTAAGGGAAAAGATAGGATTGACGATGAGGATATTACTTTCCAACGAATGGTTGCAAAGGGATCTTGGGTTCCTGTATTGGGTGGCTGATTCAAGCAGATGCAAGAGGTTGCTGGGGAGCGTGGAGGTTACCTTCATGGTCGAGGCGTATGCAGCCTTGGACAGTGATGATCTACTTTATCTCAAGGAGCAAATGGAAGCTGAGGAGGATGCAGAGCGCCTCCTTCGCCGAACTGAGAAAAGGGCATTTGCTGCATTTAAGATATCCTTTGGGCTGCTTGTTAAGTTGTATGTATTACCTTGTTTTCCCTTCACCAACAAATACAGAGCTGCAAGTTTAGCAGATTCAACACCTGCATCTGTACCATTGGCATTTCGCGTTGAGCCAAAGCCAAAGAGTGGTATTAGGCAGCAAGATTTGCTGAAAAAAGTTGTTGAGATTAAACCTAAGAGGCCAAGATCTGATGGCAACCAGTCAACCCCAGCTTCTCAAAATGCCCCTGTCACAACATGTAAGCCTGATCATGATCCTTCAAAAGAGAAGCAATCTTTTTCAGGACCAAAGAAAGTGGAGGAACAATCTTTATCTGCATCAAAGAAATCTGAGGAGCATGCTCCTTTGGGGTCACATGAAACCGAAGCTAAGCCTAGGATTGAAAACTCTGGTGGGGGATTACTGGGCCTGGCATACGATAGTTCTGATGATGAATGA 2163 0.4239 MRENISETWLVLISVILVTAIFAKIILFKLGKEDKRKCRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGRLFISSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMVQTLGNFNNNQVILLQDVCRKVAIHLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGYAYHTAMKARENIISKINKIIEEHRQNGAPTEGSGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRAMKQLLDEHSSLRRDSADELLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDVQYQAVHLDEKVYSGALEFNPWRWMEHENEEKRNWRSSPFYAPFGGGARFCPGAELARLQIALFLHYFVTTYRNQIQFQTLDVLFSHHFPLSKAILQSKKRWQEEKLENTQISATPKIRNGVREKIGLTMRILLSNEWLQRDLGFLYWVADSSRCKRLLGSVEVTFMVEAYAALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFGLLVKLYVLPCFPFTNKYRAASLADSTPASVPLAFRVEPKPKSGIRQQDLLKKVVEIKPKRPRSDGNQSTPASQNAPVTTCKPDHDPSKEKQSFSGPKKVEEQSLSASKKSEEHAPLGSHETEAKPRIENSGGGLLGLAYDSSDDE 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01801 720 MobiDBLite consensus disorder prediction 622 637 - -
Vimu8g01801 720 Pfam Cytochrome P450 41 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 MobiDBLite consensus disorder prediction 657 701 - -
Vimu8g01801 720 Gene3D Cytochrome P450 30 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 Coils Coil 545 565 - -
Vimu8g01801 720 CDD CYP90-like 73 436 - -
Vimu8g01801 720 PANTHER CYTOCHROME P450 26 37 435 - -
Vimu8g01801 720 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Vimu8g01801 720 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 SUPERFAMILY Cytochrome P450 36 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g01801 720 MobiDBLite consensus disorder prediction 622 720 - -
Vimu8g01801 720 MobiDBLite consensus disorder prediction 638 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01801 Vimu-Chr8 23805162 23814625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01801 1 436 Cytochrome P450 AT1G73340 68.709 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01801 - - gmx:100806921 802.357