Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu8g01797 | ATGGCACCCTCAACTTCTCAAGTCATCACCTGCAAAGCTGCAGTGGCATGGGGAGCTGGGGAGCCACTGGTGATGGAGGAAGTGGAGGTGAGCCCTCCCCAACCAATGGAGATTAGGATTAAGGTTGTCTCCACCTCTCTCTGCCGTAGTGATCTCTCTGCTTGGGAGTCTCATGCCATATTTCCTCGCATATTTGGCCATGAAGCATCAGGGATTGTTGAGAGTGTGGGACTGGGAGTGACTGAATTCAAAGTGGGTGACCATGTGCTAACAGTATTCATTGGAGAATGCATGACATGCAGACACTGTACATCTGGAAAAAGTAACATTTGTCAAGTTTTAGGATTGGAAAGAAGGGGTTTAATGCACAGCGATCAGAAGACACGCTTCTCAGTAAAAGGGAAGCCTGTTTATCATTATTGTGCTGTTTCAAGTTTCAGTGAATACACAGTAATCCATTCCGGATGTGCAGTGAAAGTCAGCCCCCATGCGCCTCTTGAGAAAATTTGCCTTCTGAGCTGTGGGGTTGCTGCAGGTCTGGGTGCAGCATGGAATGTTGCCGATGTGTCAAAAGGATCAACTGTAGTGATTTTTGGTCTTGGAACTGTAGGCCTATCCGTTGCTCAAGCTGCAAAACTAAGAGGTGCATCTAGAATAATTGGTGTTGACAACAACCCACAGAAGTGTGAAAATGCTAAGCATTTTGGGATTACAGAAGTTGTTGACCCGAATTCCTGTGAAGAACCTATTGCTCAGGTTATTAAGCGGATTACTGATGGCGGAGCAGATTTCTCTTTTGAATGTGTTGGTGACACTGATATGATAACCACTGCATTGCAGTCATGCTGTGACGGGTGGGGTTTGACTGTAACACTTGGGGTGCCAAAGGCAAAGCCTGAGATGTCAGCTCATTATGGACTACTACTAATGGGAAGAACATTGAAAGGATCTCTATTTGGAGGATGGAAACCAAAATCTGATCTTCCTTCATTAGTAGAGAAGTATGTCAACAAGGAAATCCAGATTGATGACTACATAACACACAATTTGCCATTTGATGACATCAACAAAGCTTTCAATCTCATGAAGGAAGGAAAGTGTCTGCGTTGTGTTATCCACATGCCAAGATAA | 1131 | 0.4465 | MAPSTSQVITCKAAVAWGAGEPLVMEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGIVESVGLGVTEFKVGDHVLTVFIGECMTCRHCTSGKSNICQVLGLERRGLMHSDQKTRFSVKGKPVYHYCAVSSFSEYTVIHSGCAVKVSPHAPLEKICLLSCGVAAGLGAAWNVADVSKGSTVVIFGLGTVGLSVAQAAKLRGASRIIGVDNNPQKCENAKHFGITEVVDPNSCEEPIAQVIKRITDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKAKPEMSAHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYVNKEIQIDDYITHNLPFDDINKAFNLMKEGKCLRCVIHMPR | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu8g01797 | 376 | FunFam | S-(hydroxymethyl)glutathione dehydrogenase | 179 | 317 | - | - | |
Vimu8g01797 | 376 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 66 | 80 | IPR002328 | GO:0008270|GO:0016491 | |
Vimu8g01797 | 376 | SUPERFAMILY | GroES-like | 5 | 184 | IPR011032 | - | |
Vimu8g01797 | 376 | FunFam | Uncharacterized protein | 318 | 369 | - | - | |
Vimu8g01797 | 376 | FunFam | Alcohol dehydrogenase 6 | 14 | 195 | - | - | |
Vimu8g01797 | 376 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 165 | 338 | IPR036291 | - | |
Vimu8g01797 | 376 | Pfam | Zinc-binding dehydrogenase | 203 | 326 | IPR013149 | - | |
Vimu8g01797 | 376 | SUPERFAMILY | GroES-like | 325 | 373 | IPR011032 | - | |
Vimu8g01797 | 376 | Gene3D | - | 14 | 369 | - | - | |
Vimu8g01797 | 376 | Gene3D | - | 179 | 317 | - | - | |
Vimu8g01797 | 376 | Pfam | Alcohol dehydrogenase GroES-like domain | 36 | 156 | IPR013154 | - | |
Vimu8g01797 | 376 | CDD | alcohol_DH_plants | 9 | 373 | - | - | |
Vimu8g01797 | 376 | PANTHER | ALCOHOL DEHYDROGENASE | 7 | 372 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu8g01797 | Vimu-Chr8 | 23775652 | 23781007 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu8g01797 | 37 | 174 | Monolignol Biosynthesis Gene Families | AT4G37990 | 26.056 | 6.74e-10 | 58.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu8g01797 | K00001 | - | gmx:100819938 | 717.227 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu8g01797 | 8 | 23775652 | 23781007 | Vimu8g01797 | 8 | 23775652 | 23781007 | ECH |