Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01729 ATGTTCAAATTAGTCCGAATTTTCACTCTGATGGATGAACCTATCTTGGATGCCGTCTGTGAGAGACTGAGACAGAAGACATACATAAAAGGAAGTTTAATTTTGACCCAAGGTTGTCTAGTTGAGAAGATGATCTTTATTGTGCGCGGAAAATTGGAGAGCATTGGAGAAGACGGAGTTGGAGTTCCCTTGTCTGAAGGAGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAACATTCTTCTTCTGTAAGCACAGGTATAGCTATACTTGGTATGATGACAACATACTTGCTAACCACACTTAACTAG 315 0.4032 MFKLVRIFTLMDEPILDAVCERLRQKTYIKGSLILTQGCLVEKMIFIVRGKLESIGEDGVGVPLSEGDACGEELLTWYLEHSSSVSTGIAILGMMTTYLLTTLN 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01729 104 CDD CAP_ED 7 87 IPR000595 -
Vimu8g01729 104 Gene3D Jelly Rolls 5 100 IPR014710 -
Vimu8g01729 104 SUPERFAMILY cAMP-binding domain-like 5 84 IPR018490 -
Vimu8g01729 104 ProSiteProfiles cAMP/cGMP binding motif profile. 7 85 IPR000595 -
Vimu8g01729 104 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 3 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01729 Vimu-Chr8 23103056 23105517 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01729 2 83 Ion Channels AT3G17700 70.732 4.70e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01729 K05391 - ccaj:109789004 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01729 8 23103056 23105517 Vimu8g01729 8 23103056 23105517 ECH