Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01720 ATGGGTACTTTAAGAGATAGCGGGTGGATCGGAGTTGATTGGGCCGCTGGCTGGATTTGGGCCTACCTAAGTAGGACTATGCCGTTTGGTGGGTTTCTGCTGCTGCTTTTGGGGGGCTTGGAGAAAACGAGAGAGAGTGGAAGAGACGACGCTCAAGGAAGAAAAGTGCACGTGACCGGAGCTGACAGCGGAGAGCAAAAGGAAACCATCCGATTGGGAGAAGCTCGAAGCGTCAAGGTCAAGGACTACGCCGTTTGGTGGGTTTCTTCTGCTGCTTTTCGGGGTTCCAAGGCATCAATTTTCCCATTTGCTAGCCTCGAGCTAGGGCTTGCAGAAAACGAGAGAGAGTGGAAGAGACGACGCTCAAGGAAGAAAAGTGCACTCAAAGAGATTGAAGTTGATCGGAAGGCTTGGAGAGGAGAGCAAAAGGAAACTGACCGATTGGGAGAAGCTCGAAGCGTCAAGGTCAAGCCTGTGGTGGCTTCAACAATGTCACCCGTTTGTGATTTTCATTTCTTTCTTATACCGATTCCAGACTACGCCGTTTGGTGGGTTTCTTCTGCTGCTTTTCGGGGTTCCAAGGCATCAATTTTCCCATTTGCTAGCCTCGAGCTAGGGCTTGGAGAAAACGAGAGAGAGTGGAAGAGACGACGCTCAAGGAAGAAAAGTTCAAAGAGATTGAAGTTGATCGGAAGGCTTAGAAAGGAGAGCAAAAGGAAACCGTCCGATTGGGAGAAGCTCGAAGCGTCAAGGTCAAGGGTTTTATGCCCATTTCGTAGTGTAAATTCTGGATTCTCTGGTTGTTGGATTGATCACTTGGTGACAACCCGTGGTGGCTTCAACAATCTGGGGGAAATGATTGCTACGCATAAACGGCTGAAAGAGCAGAGTCAATTCCTGTTTATCCCAGGTCCCGATGATGTAGGTCCTTCTACTGGCCTTCCTAGGTGTGCTCTACCAAATTATTTAACTGAAGAACTCCAAAAGAACATACCAATGTCATATTTTCAAGCAACTCTTGCAATCAGACAAAAGCCATAA 1041 0.4803 MGTLRDSGWIGVDWAAGWIWAYLSRTMPFGGFLLLLLGGLEKTRESGRDDAQGRKVHVTGADSGEQKETIRLGEARSVKVKDYAVWWVSSAAFRGSKASIFPFASLELGLAENEREWKRRRSRKKSALKEIEVDRKAWRGEQKETDRLGEARSVKVKPVVASTMSPVCDFHFFLIPIPDYAVWWVSSAAFRGSKASIFPFASLELGLGENEREWKRRRSRKKSSKRLKLIGRLRKESKRKPSDWEKLEASRSRVLCPFRSVNSGFSGCWIDHLVTTRGGFNNLGEMIATHKRLKEQSQFLFIPGPDDVGPSTGLPRCALPNYLTEELQKNIPMSYFQATLAIRQKP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01720 346 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 275 337 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01720 Vimu-Chr8 23019728 23022527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01720 277 339 Core DNA Replication Machinery Family AT5G22110 63.492 2.49e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01720 K02325 - ming:122080190 97.0561