Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01694 ATGGATGGTGATAATGGTCTCAACATCCGTAACTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCATCCATGCCGGAAAAGCCTTTAATCGGAGGGCGGAATGCTGCGGTTTTATCTGCCACAAATGGGGCATTTCACCACAGAGACATTGGTATGTCCCACGCTACATACCCTATGGAATACGTGAGAGATGCTTGGATTAGTAGTCAGAGAGACAAGTATATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCAGAGACATCTTCGGCACATCAAATTCAAATGATTCCACCGCCGGAATTGCCGAAGGAAGAAAGGGCAGTGGAAGAGGAACCTGTTGTTGAGAAGGCAACTGGGGGCAGTCGCAAGAAAAGACAGAGCCCTAAGGTGCCGAAATCTCCCAAGGCAAAGAAGTCCAAGAGGGGCCCTCGTGTGCCAAAGAATGAGAATGCTCCCACAGTTCATCGTGCAAGGGTTCCAAAGAAAACTACTGAAATTGTAATAAATGGTATTGACATGGATATTTCTAGTATTCCAATCCCTGTTTGTTCATGCACAGGAGCAGCTCAACAGTGTTACAGATGGGGCTCTGGAGGGTGGCAATCTGCATGTTGCACAACAGGCATGTCAGTTTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTGGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCTATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 852 0.4566 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSATNGAFHHRDIGMSHATYPMEYVRDAWISSQRDKYMNMIPTNHNYGGIPETSSAHQIQMIPPPELPKEERAVEEEPVVEKATGGSRKKRQSPKVPKSPKAKKSKRGPRVPKNENAPTVHRARVPKKTTEIVINGIDMDISSIPIPVCSCTGAAQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01694 283 MobiDBLite consensus disorder prediction 135 154 - -
Vimu8g01694 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Vimu8g01694 283 PANTHER - 1 283 IPR010409 -
Vimu8g01694 283 MobiDBLite consensus disorder prediction 113 173 - -
Vimu8g01694 283 MobiDBLite consensus disorder prediction 114 134 - -
Vimu8g01694 283 SMART GAGA_bind_2 1 283 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01694 Vimu-Chr8 22773391 22776345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01694 1 283 BBR or BPC Transcription factor family AT2G01930 51.342 2.11e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vimu8g01694 GAGA_bind 1.7e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01694 - - gmx:100784091 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01694 8 22773391 22776345 Vimu8g01694 8 22773391 22776345 ECH