Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01661 ATGTGTTTCAGACCACGCTGCAGTTTCTGCTACATCTTCTTCACACTTTACACCCTTATCTTCATGTTCATGCTTTCTTTGATACTCTTCTGGATAATCATATCTCCTTCAAGTGTCAAGTTCCACGTAACCGATGCCTCTCTAACACAGTTCAACCTCACCACAAACAACAACACCTTGTATTACAACTTCAAGGTCAATGTCACAGTCAGAAATCCCAACAACAACATCGTAGTGTACTATAGGAAGATCACAGCAATAGCTTGGTACAAAGATAATGCTTTTGGTTGGGTGAGCTTGACACCCTTTGACCAAGGCCACAAGAACACCACCTTCCTTCAAGCAATGTTTGTAGGGCAGAGTGTGATTAAGCTCAAAGCTAAACAACTTGGTGAGTATAAAGAGGAGACAAATGCTGGGATTCACAAGGACTTAGCTGTGGATTTTGATCTTAATATCAGAGCCAAGTATGCAAGATTCAAGAGTTCTCGTTTCAATCCACCCATTGTTCAGTGTCGTCGCTTAAGAGTTCCTTTGATTTCTAATGGGAAATCAGCATCTCCTTTTGCTGTCACCAGATGCAGCAGTGCCTATTTCTTTTCTGATCGTGACGCTGAGGCATCATAG 627 0.4195 MCFRPRCSFCYIFFTLYTLIFMFMLSLILFWIIISPSSVKFHVTDASLTQFNLTTNNNTLYYNFKVNVTVRNPNNNIVVYYRKITAIAWYKDNAFGWVSLTPFDQGHKNTTFLQAMFVGQSVIKLKAKQLGEYKEETNAGIHKDLAVDFDLNIRAKYARFKSSRFNPPIVQCRRLRVPLISNGKSASPFAVTRCSSAYFFSDRDAEAS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01661 208 PANTHER OS05G0367900 PROTEIN 6 178 IPR044839 GO:0098542
Vimu8g01661 208 Pfam Late embryogenesis abundant protein 67 162 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01661 Vimu-Chr8 22435639 22440771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01661 33 179 SNARE and Associated Proteins AT1G32270 31.293 3.69e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01661 - - gmx:100784278 353.984